Gene PHATRDRAFT_12401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12401 
Symbol 
ID7201124 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp613020 
End bp613945 
Gene Length926 bp 
Protein Length277 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180276 
Protein GI219119019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCAGC TATTGGGAAT GAACTGCGCA GCTCCCACCG ATTTTTCTTT TTCGCTCAAA 
GGCTTCTGCC GTAGAGGTGG AGAGACCGAC AAGCATTCGC ACGGATGGGG CGCTACTATT
TACGAAGGCC GAGGTTTGCG ATGTTTTCAC GATACGTTAC CCGCGTGTCA AAGTCCCATT
GCCGAACTTA TTCAAAACTA TCCCATTCGA ACCTATGTAC GTCTTCTCTG CGGAGACAAT
CCGCTCCCTA CGTTACTCGT TCCCTGCCTC TAAACCTGCT CTCTTTTTTT TTTTTACACG
CCCCCGTACA GAATATGTTG GCCCACATTC GCTACGCTAC TCAGGGTGAG GTGTCACTCG
AAAACGTGCA TCCCTTTACC CGGGAACTCT GGGGGATTAA CTGGAGTTTC GCGCACAATG
GTGACATGCC TCTCTTCGCC AACACGGACC AGGATATATT CCTCGGTAAA ACAACATCCG
ATACCGTCCA TTTCAACGCC GTTGGTGATA CAGATTCAGA AGCGGCCTTT TGTGCCATAT
TGAACGCGCT CAAAGCCGAA TTTCCGGAAG GCTTGCCGAC TTTGTCCGTC CTACACGAAT
TTCTGAACCA CATCTGCGAC GAAATTATTG CTGGCCGTAG CGAGGATACC ATTTTCAATT
TTTTGCTCGG CTGTGGTCAA TACACGTTGT TCGCCTATTC CTGGCCCGGG GCGCGGTCCG
GTTCCACCGT GTGGAACGGC CTGCACTACA TTGTGCGCGA GCCGCCCTTT TCGACGGCGC
GACTGCTGGA TGTGGACTAC ACCATTGACT TTTCGGCTGT GACGCAACCG AACGATCGCG
TCGCAGTGAT CACAACCAAA CCGTTGACGG AAGAAGCGGG ATGGACGGAA ATGAAACGGG
GCGAGTTACT CATGTTCGAC AAGGGT
 
Protein sequence
MCQLLGMNCA APTDFSFSLK GFCRRGGETD KHSHGWGATI YEGRGLRCFH DTLPACQSPI 
AELIQNYPIR TYNMLAHIRY ATQGEVSLEN VHPFTRELWG INWSFAHNGD MPLFANTDQD
IFLGKTTSDT VHFNAVGDTD SEAAFCAILN ALKAEFPEGL PTLSVLHEFL NHICDEIIAG
RSEDTIFNFL LGCGQYTLFA YSWPGARSGS TVWNGLHYIV REPPFSTARL LDVDYTIDFS
AVTQPNDRVA VITTKPLTEE AGWTEMKRGE LLMFDKG