Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12401 |
Symbol | |
ID | 7201124 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 613020 |
End bp | 613945 |
Gene Length | 926 bp |
Protein Length | 277 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180276 |
Protein GI | 219119019 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTCAGC TATTGGGAAT GAACTGCGCA GCTCCCACCG ATTTTTCTTT TTCGCTCAAA GGCTTCTGCC GTAGAGGTGG AGAGACCGAC AAGCATTCGC ACGGATGGGG CGCTACTATT TACGAAGGCC GAGGTTTGCG ATGTTTTCAC GATACGTTAC CCGCGTGTCA AAGTCCCATT GCCGAACTTA TTCAAAACTA TCCCATTCGA ACCTATGTAC GTCTTCTCTG CGGAGACAAT CCGCTCCCTA CGTTACTCGT TCCCTGCCTC TAAACCTGCT CTCTTTTTTT TTTTTACACG CCCCCGTACA GAATATGTTG GCCCACATTC GCTACGCTAC TCAGGGTGAG GTGTCACTCG AAAACGTGCA TCCCTTTACC CGGGAACTCT GGGGGATTAA CTGGAGTTTC GCGCACAATG GTGACATGCC TCTCTTCGCC AACACGGACC AGGATATATT CCTCGGTAAA ACAACATCCG ATACCGTCCA TTTCAACGCC GTTGGTGATA CAGATTCAGA AGCGGCCTTT TGTGCCATAT TGAACGCGCT CAAAGCCGAA TTTCCGGAAG GCTTGCCGAC TTTGTCCGTC CTACACGAAT TTCTGAACCA CATCTGCGAC GAAATTATTG CTGGCCGTAG CGAGGATACC ATTTTCAATT TTTTGCTCGG CTGTGGTCAA TACACGTTGT TCGCCTATTC CTGGCCCGGG GCGCGGTCCG GTTCCACCGT GTGGAACGGC CTGCACTACA TTGTGCGCGA GCCGCCCTTT TCGACGGCGC GACTGCTGGA TGTGGACTAC ACCATTGACT TTTCGGCTGT GACGCAACCG AACGATCGCG TCGCAGTGAT CACAACCAAA CCGTTGACGG AAGAAGCGGG ATGGACGGAA ATGAAACGGG GCGAGTTACT CATGTTCGAC AAGGGT
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Protein sequence | MCQLLGMNCA APTDFSFSLK GFCRRGGETD KHSHGWGATI YEGRGLRCFH DTLPACQSPI AELIQNYPIR TYNMLAHIRY ATQGEVSLEN VHPFTRELWG INWSFAHNGD MPLFANTDQD IFLGKTTSDT VHFNAVGDTD SEAAFCAILN ALKAEFPEGL PTLSVLHEFL NHICDEIIAG RSEDTIFNFL LGCGQYTLFA YSWPGARSGS TVWNGLHYIV REPPFSTARL LDVDYTIDFS AVTQPNDRVA VITTKPLTEE AGWTEMKRGE LLMFDKG
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