Gene PHATRDRAFT_12305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12305 
Symbol 
ID7201129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp636305 
End bp637213 
Gene Length909 bp 
Protein Length303 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180282 
Protein GI219119031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAATCATTGA AAGAAGTAGC CGAGTTCATA CAATCGAAAA AATGTCAATC CATCGTGGTG 
CTGGCGGGCG CCGGTATGTC CGTGTCGGCG GGGATTCCTG ATTTTCGCAG TGCGGACGGT
CTATACGCAA CCTTGGATCC CAACCAATTG ACCGCAACGC CCTTGGAACG AGAGGCCATG
CGGCGTGATC CCACTGTGGC ATTGGATCAA ACATTGTTTC TGCAAAATCC GCTACCCATG
TTAGAATTGC AGAGGGAATT TATTTTAGGT ACTCATGACC GACGTTGGAA AGCGACATTA
GCACATCGCT TCGTGGAACT CTTACACGCC AAAACTGGCA AACTCGTACG CCTGTATACG
CAAAATATTG ACGGTCTGGA AGACCAGTGT GCGTTGTTGC CACGAGACAA GGTCATTGCT
GTACATGGCT CTATGGACCG CGCTGAGTGT GCTCGTTGTC ACACGGAAGC TGATTTCGAT
GAGTTCTGTG ATTGTATTAA ACGCCAAATA AAGGATTTAT CAGGCCAAGA CGCAAGTGCG
CCCAAACAAT CGACGGCTAT CGATTGCAAC ATATGTGGCT ATGCTGCAAT GAAACCATCT
ATCGTTCTCT TTAAATCAAG TCTCCCCCGG ATCTTCTTTG AGAATCTACC TAAGGATGTA
GAAAGTGCAG ACATATTGAT CATTATGGGT ACATCTTTAC GAGTGGCACC GGCGAATAGT
TTAGTCTGGC GCGTTCCACG ATCGTCGTTG CGATTACTTG TCAATCGCGA GCCCGCTGGA
AATCACCTAG GAATGAGCTT TGATGAAGAT GCCACTCGTG ATTACTTTGC CGAAGGAGAT
TGTGACGACA TGCTACTAGA ATTAATGGAG CATCTCGGCT GGGTCAACGA GTTGAAGCCG
CTTCTAGAG
 
Protein sequence
KSLKEVAEFI QSKKCQSIVV LAGAGMSVSA GIPDFRSADG LYATLDPNQL TATPLEREAM 
RRDPTVALDQ TLFLQNPLPM LELQREFILG THDRRWKATL AHRFVELLHA KTGKLVRLYT
QNIDGLEDQC ALLPRDKVIA VHGSMDRAEC ARCHTEADFD EFCDCIKRQI KDLSGQDASA
PKQSTAIDCN ICGYAAMKPS IVLFKSSLPR IFFENLPKDV ESADILIIMG TSLRVAPANS
LVWRVPRSSL RLLVNREPAG NHLGMSFDED ATRDYFAEGD CDDMLLELME HLGWVNELKP
LLE