Gene PHATRDRAFT_12252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12252 
Symbol 
ID7201089 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp439317 
End bp439886 
Gene Length570 bp 
Protein Length131 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180235 
Protein GI219118937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTAGTTGTGA TTGATGAAAT TGATGCCGTT TTCCGCAAAC GATCGTCGTC GGAAGAGAGT 
GGGGAGGCAA CACGGTCATC CGTAGTAAAC CAAATCTTGG CAAAACTTGA TGGGGTCCAT
GCCATTCCAA ATGTACTCTT AATTGGCATG ACAAACCGTC GAGAGCTTTT GGACGATGCG
CTGTTGCGTC CTGGACGCTT GGAAGTGCAA ATCGAAGTCC CATTGCCTGA TAGAGATGGC
CGACGCGAAA TCTTACAAAT CCACTTCGAC GCTCTACGAA AACGCGGTCG CTTGAGTAGA
CCACTTTGTT GTGCGATTGA TGGAGTCCCT CCCAATTACG ATTCCGAGAA AGGCATCGAC
CCGGGTGCCG ACTTGTTCCA GTCCCAGAAC GGTCGGGTTC GTAAGCGAGA TACCATCAAA
CGAGCTGTGG GACGCGCCAC TGGAAGGTTC TCGTCTGCGT TGCGTCCGGC TTACGATCTG
GCAGCCGACT ATGTGACTAA TGGCTTTTCT GGCGCCGATA TTGCAGGCCT AGTACGGTGT
GCGGGATCCA TAGCATTATC TAGGTCTCGC
 
Protein sequence
VVVIDEIDAV FRKRSSSEES GEATRSSVVN QILAKLDGVH AIPNVLLIGM TNRRELLDDA 
LLRPGRLEVQ IEVPLPDRDG RREILQIHFD ALRKRGRLSR PLSDYVTNGF SGADIAGLVR
CAGSIALSRS R