| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54396 |
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| Symbol | |
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| ID | 7200495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | - |
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| Start bp | 42813 |
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| End bp | 44699 |
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| Gene Length | 1887 bp |
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| Protein Length | 487 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | fasciclin domain-containing protein |
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| Protein accession | XP_002179780 |
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| Protein GI | 219117992 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCTT GCTTCGCAAT AAGTGTATGG ATTCTGCTGT GGCTAGGACC GCAAGCGATC
GGCGCCAAGC CAGCTCAAAG TCTCCGATCT CGGAAAGTGC TTTCCAACGA CAACAAACGC
CGGAAGAATG AGCCACTCGG GCAGGTCGTC ACTTTCGAGG AACTATTGAG GGAAAACGGA
CTGTTTGAAG TTTTGCCGGA AGTCGCTGCG ATGAGTTTGC CGCCAACACA TGCTCCGACA
AATACAACAC CGATGGCGCC CACTAGGATT CCAAAGGGTT CGCCGACTAA GAACCCCAGT
GGTGCACCGA CGCAAGCTCC GATAGTCACA GCCAACACGC CAATGGTAAA TCTGTCGGTG
TCACCAGTGT CGGCAGAGAC TCCTGTACGC ACTTCAAAGA GTCCCACTTC AGTACCAACA
GACATTGGCG ATCCCACTTT GCAACCTACG ATCGGTTCTA TACCTCCGAT AGAGATACCG
ACGGGCGCAC CGTTGCAAAG CATTGCTTTT TTCATCGCAA ACACGCCGCG ATTTTCAATC
TTGGAGGAAG CACTCGTAGC AGCCAACCTT CTCGATACTT TCAGCAGAGA TATTCAGCTA
ACTGTGTTCG CACCGAACGA TGCCGCATTC GAAACATTAG ACCTAGTCTT TTTGGAGGCA
TTATTGACCA ATCCGGGATT TGGTCTCCAC CTGTTTCAGC TGCTCACTTA CCATGGAATT
TTGGGCTCCT TTCCCTCAGC CAGTTTGACA AGCGGTCGAG AGCTCGCTTC GCTCCTTGAC
GGTTCAGACC TCACAGTTTC GATAATCTCA GGGAGCATAT TCCTCAATAC CACAGCGGTG
GTAAGTGGTG TCTCGGGGGC CTTTCCATCT AGGCTAATCG AGACAAATGT ACAGGTATCA
AATGGAATTC TCCACGAAAT GGAGATGGTC TTGTTACCCA ACTTTGCCTT CTTTTATATT
TTCGACGTTT TGCAACAAGG TGTAGCAACT TTCAGTACTC TTTCTTCTCT CATCATTCAG
GCTGACCTTG AGCAAATTCT TCAAGAAAAA GAAATGACGG TGCTTGCCCC CAATAACGAT
GCGTTTGCCA TGCTACCAAG CCAGACTTTT GCTTTCCTGC AGAACCCAAC GAATGTCGAC
ACCCTTCGTC AAGTCCTGAC CTATCATTTG TCAACTGATG TATTCAATTC CCTTCAACTG
ATTGATACTG ACAGTTTGAA CACATTGGAG GGAAGCACAG TCGCGGTTAC GGCTATATAC
GATCCGGAAT CTGCAATGTT GGTGAACCTA TTTTTCAATT TTGTTGGAGG GGTTAGATTT
AATGTATTGG CAGCAAATGG AATAGTTCAT GAAATTGGCG GACTCCTTGT TCCTCCAAAT
GCCAGTGTTC CTGGGGTTGG CATGTTCAGC ATGCAGGCTG TGACTGAGTA TCTGGAGATA
CTTGCTTCAG CCAATCACAC TTGAGAGAGA TCTGGGTTCA TGTCATGAAC GCGTAGGGGA
CAAACCGGCA TTAATTTATA CTTTCCTTCT GGATGCAGCT GTTGGCTTTC TTCAAATCTT
CGTCACAACT TGTAGCCCTT ATTGCAACCA ACTTTGCCTA TACTGTTAAC AAGCTTTGTG
ATTATTTTTG CTAAACCGTA TAAATAATTC CTGGATTCTT CTGATGAGGA AAAAGCGCCA
GTTAGCAGCA GGCAATAAAA TGGCAAATAT GCTCCATCCA TACTTTATTC ATGTATTTTT
GTCCAAACAC ATTGTCACTC GACGTCTGGT AATCGGACTC CTCTTCACAT TTCTCGCTTT
GCCCTCATTT TATTAGGTCT GCATAGGCAA TAAACCACCT ACATCAGAAA AAATAATCCC
AAAACTAGTG ATTCTCCAGG TGCCGTG
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| Protein sequence | MKACFAISVW ILLWLGPQAI GAKPAQSLRS RKVLSNDNKR RKNEPLGQVV TFEELLRENG
LFEVLPEVAA MSLPPTHAPT NTTPMAPTRI PKGSPTKNPS GAPTQAPIVT ANTPMVNLSV
SPVSAETPVR TSKSPTSVPT DIGDPTLQPT IGSIPPIEIP TGAPLQSIAF FIANTPRFSI
LEEALVAANL LDTFSRDIQL TVFAPNDAAF ETLDLVFLEA LLTNPGFGLH LFQLLTYHGI
LGSFPSASLT SGRELASLLD GSDLTVSIIS GSIFLNTTAV VSGVSGAFPS RLIETNVQVS
NGILHEMEMV LLPNFAFFYI FDVLQQGVAT FSTLSSLIIQ ADLEQILQEK EMTVLAPNND
AFAMLPSQTF AFLQNPTNVD TLRQVLTYHL STDVFNSLQL IDTDSLNTLE GSTVAVTAIY
DPESAMLVNL FFNFVGGVRF NVLAANGIVH EIGGLLVPPN ASVPGVGMFS MQAVTEYLEI
LASANHT
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