| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54395 |
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| Symbol | |
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| ID | 7200494 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | - |
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| Start bp | 38311 |
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| End bp | 39819 |
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| Gene Length | 1509 bp |
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| Protein Length | 437 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | fasciclin domain-containing protein |
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| Protein accession | XP_002179779 |
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| Protein GI | 219117990 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.190413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCT CCACCGTTCT ATTCGTACTG CCTTTTCTTG GCTCCACTGC AGGGGCGCTC
CTCCGAAAGA ACGGCCCAAA ACGTTTTCGA AGCCGTTTGA TTGTGCCTTC AAGCAAAATC
TCCTCTTCGA CCGTTGCGTC GAAAAGCGAC GTTGGCAACT CTGAGCCATT TGACAACTTT
GAAGGCTTTG TCAATCTCCT ATCAGATACA GATATGAGTA TTTTACACAC TCCCACCGCC
TCTCCTGCAG ATGGCGGTGG AATCACCGCT ACAGGCCCTC CAGCTGCGAA CGTTGCTCCT
ACACTATCTC CGGTCGAATC GCAACGAGCG TCCCTATGAC AGCGGCTCCC ACAAATTCTC
CCGTCGCAGG AAGCCCAACT AGTGCTACCA TAATTCCTGC AACAGATAGT CCAACAGGAT
CCACTACGAC CCCGGTTGGT TCAGCTCCAT CAAGTAGCCC TGTTGAGGGT ATCCCCATGG
ATCCACCTAC GGACTCAGGC ATGGTCTCAA TTGAAGGACT CGTGTCCTCT CGCGAATCGC
TTGCCATCTT AGAGACAGCT CTCATCCAGA GTAATCTATT GTCTGTTCTA GAGGATCCGG
GGCCCTATAC TTTGCTGGCT CCAACTACCG CGGCATTTAG CGCTATTGAT ATGAATGTCC
TGGAGTTATT GCTCACTCCT GAATTCAACT TTCAACTGAA AGACATTTTG CTGTATCACG
TAATTGGTGA GACTTTCTTA AGGTCTGATC TTGTGGATGA TGAAGAACTT GCCACCCTGT
CCGATGGTAC ACTTGGGGTT GTGGTCAACA ATGGAGAAGT TTTCTTTATG TCGGAAGCTG
CTTCCGATAA AGCGGTTGCC GATGCAACAA GTAGTACAGT CATTTCTCCA TCAAAAGTTG
TCACAGCAGA CTTGCTTGCC AGAAACGGAG TTGTCCACGA AATCGACACC GTTTTCTTGC
CTTCCTGGGC ATACTTGAAT CTGCTTCAAC AGCTCGAGCA GGACGAAGAC TTTTCGACGC
TCGTGGAGTT CTTGAGCCTG GCAAAACTGA GTGAATCTAT TTCTTTGACC CGAAGTTTCA
CGTTTTTCGC ACCCACAAAC GACGCTTTCG AGCTCCTCAG TAAAGATCAG CTCGATTTCC
TTCGCGATCC AGCAAATCTT TTGAGTCTGC AAAACATTTT GTGGTTCCAT TTGAGCCCAC
AAGTCTATAA TCATGAAGTA ACAGTCGGTA CCGTGCAGTT GCCCACGGCG CAAGGAACAC
CACTGCAAGC TGTGTCAGAC GGCATCAGTC TCCCCACCTT TCAGACAGAC GCCGGAGTTG
AAGAAATACT GCTGAATCTG GCAGGAAATA TATATGCCGT AAATCGTGTC TTGCTGCCCA
TTTCAAGACA GTAGCCGACC TAGGAGAGTT GTTTTCTCCA TGTAAACAAA GGTCCTCCTC
GCTCACATAT TCTTGAATGT GAATTTGAAC TGCGAAGTAA CAAAATTCTA TAAATTATCC
TTGTCACAG
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| Protein sequence | MKLSTVLFVL PFLGSTAGAL LRKNGPKRFR SRLIVPSSKI SSSTVASKSD VGNSEPFDNF
EGFVNLLSDT DMSILHTPTA SPADGGGITA TGPPAANVAP TLSPVESQRA PTGSTTTPVG
SAPSSSPVEG IPMDPPTDSG MVSIEGLVSS RESLAILETA LIQSNLLSVL EDPGPYTLLA
PTTAAFSAID MNVLELLLTP EFNFQLKDIL LYHVIGETFL RSDLVDDEEL ATLSDGTLGV
VVNNGEVFFM SEAASDKAVA DATSSTVISP SKVVTADLLA RNGVVHEIDT VFLPSWAYLN
LLQQLEQDED FSTLVEFLSL AKLSESISLT RSFTFFAPTN DAFELLSKDQ LDFLRDPANL
LSLQNILWFH LSPQVYNHEV TVGTVQLPTA QGTPLQAVSD GISLPTFQTD AGVEEILLNL
AGNIYAVNRV LLPISRQ
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