Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_5217 |
Symbol | |
ID | 7200419 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 876956 |
End bp | 877804 |
Gene Length | 849 bp |
Protein Length | 216 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179737 |
Protein GI | 219117902 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCGGTCGAAA AAGCCCTCTT CCGGGCCCTC CGCACGTCCC GCCTCGTCGA ATCCCGCGCT TCCTCGGGAT ACTCACGTTG CGGGCGTACC GACAAGGGTG TCAGCGCCGC CGGACAAGTC GTGGCTCTAA GGCTCAAGAG CGCGTACGCG CTGGACGCCT CCTGGGACGC TGCGGGACAG GATCTGGTTG CCGAAAACGA ACTACCCAAA AACGCATACA CTCCGTTGTC GGTATACGTC ACTCCACGAC CGCGATCTAC CAAAAAACAA CGCAAAAAGC ACACTGTAGA CGTTCAAAAC AGCCAAAATG GCAACCAGCA GACTGATCCT CCCCTTCGCC AACAACGGGC ACTGCGCGAA CACGCGTACG ACAAAATTCT GAACAACTTG TTGCCCGATG ACATTCGGGT CCTGGGTTGG ATACCAGTAT CCGACGACTT TTCGGCACGC TTTTCCGCCA CTTCGCGGAC CTACCGGTAC TTTTTCCGCC GCCGTCGGAC TTTGGATGTC GAAGCTATGC GCCAAGGCCT CCATCGGATG CAAGGGACAC ACGACTTTCG CAATTTCTGC AAAATGGATG TCGAAAAGGT CTACAACTTT GAACGCCGAA TCGATAAGGC TGAAATAGTC AATATGGAGC GAGACACCGG CGTCTCCTAC TTTTTAATTG TCGGCCAGGC ATTCTTGTGG CATCAAATTC GTTACATGGC GAGTATTTTG TTCGCCATCG GTCAAGGCTT GGAAACGCCT GAGTTGGTCA CGGCCATGCT GGATATCGCG CAGAATCCGG GTAAGCCAGC CTATCCTTTG GCGGATGAGC AACCGCTAGT GCTGCACGAT TGTGGCTAT
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Protein sequence | SVEKALFRAL RTSRLVESRA SSGYSRCGRT DKGVSAAGQQ TDPPLRQQRA LREHAYDKIL NNLLPDDIRV LGWIPVSDDF SARFSATSRT YRYFFRRRRT LDVEAMRQGL HRMQGTHDFR NFCKMDVEKV YNFERRIDKA EIVNMERDTG VSYFLIVGQA FLWHQIRYMA SILFAIGQGL ETPELVTAML DIAQNPGKPA YPLADEQPLV LHDCGY
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