Gene PHATRDRAFT_5217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5217 
Symbol 
ID7200419 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp876956 
End bp877804 
Gene Length849 bp 
Protein Length216 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179737 
Protein GI219117902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCGGTCGAAA AAGCCCTCTT CCGGGCCCTC CGCACGTCCC GCCTCGTCGA ATCCCGCGCT 
TCCTCGGGAT ACTCACGTTG CGGGCGTACC GACAAGGGTG TCAGCGCCGC CGGACAAGTC
GTGGCTCTAA GGCTCAAGAG CGCGTACGCG CTGGACGCCT CCTGGGACGC TGCGGGACAG
GATCTGGTTG CCGAAAACGA ACTACCCAAA AACGCATACA CTCCGTTGTC GGTATACGTC
ACTCCACGAC CGCGATCTAC CAAAAAACAA CGCAAAAAGC ACACTGTAGA CGTTCAAAAC
AGCCAAAATG GCAACCAGCA GACTGATCCT CCCCTTCGCC AACAACGGGC ACTGCGCGAA
CACGCGTACG ACAAAATTCT GAACAACTTG TTGCCCGATG ACATTCGGGT CCTGGGTTGG
ATACCAGTAT CCGACGACTT TTCGGCACGC TTTTCCGCCA CTTCGCGGAC CTACCGGTAC
TTTTTCCGCC GCCGTCGGAC TTTGGATGTC GAAGCTATGC GCCAAGGCCT CCATCGGATG
CAAGGGACAC ACGACTTTCG CAATTTCTGC AAAATGGATG TCGAAAAGGT CTACAACTTT
GAACGCCGAA TCGATAAGGC TGAAATAGTC AATATGGAGC GAGACACCGG CGTCTCCTAC
TTTTTAATTG TCGGCCAGGC ATTCTTGTGG CATCAAATTC GTTACATGGC GAGTATTTTG
TTCGCCATCG GTCAAGGCTT GGAAACGCCT GAGTTGGTCA CGGCCATGCT GGATATCGCG
CAGAATCCGG GTAAGCCAGC CTATCCTTTG GCGGATGAGC AACCGCTAGT GCTGCACGAT
TGTGGCTAT
 
Protein sequence
SVEKALFRAL RTSRLVESRA SSGYSRCGRT DKGVSAAGQQ TDPPLRQQRA LREHAYDKIL 
NNLLPDDIRV LGWIPVSDDF SARFSATSRT YRYFFRRRRT LDVEAMRQGL HRMQGTHDFR
NFCKMDVEKV YNFERRIDKA EIVNMERDTG VSYFLIVGQA FLWHQIRYMA SILFAIGQGL
ETPELVTAML DIAQNPGKPA YPLADEQPLV LHDCGY