Gene PHATRDRAFT_45692 details

Gene Information

• Locus tag: PHATRDRAFT_45692
• ID: 7200470
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: -
• Start bp: 954184
• End bp: 956362
• Gene Length: 2179 bp
• Protein Length: 700 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179944
• Protein GI: 219118334

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.234957
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTCGAT GGAGACGCAA AAATAGATTT AAGGCAAAGC CCAAAGGCGA CAGTGCCACT 
GGTTTTAATA CGAGCTGGAG CTGGAAAGAA CGAGGAGACT TAATCCGCTA TCTCAAAACA 
TATCGTCAAC ACGCCGAACG CGTTTCCGAT GGAACGTACG ATGCCGAAAG CTTATCGATG 
AAAAAATCCT TTGTTCGAAC TATCGGGGTA GTAGAAATGC CGGTACTTGA TCAGCGAAAC 
GTGTCAGCTC CCTATTTGGC CTTGCCAAGG ACGCTATCCT CAAAGCAGCG GTTGGCTGTC 
CACGAGAGTT GCGTGGAAGG TAAAACTTTC TGCGCTGCGA AAATCCATTT ATTTCGTATT 
GCTTACTCCA ACCTTTTTTC TCAATCTATC GACATCAGCC AATCTGTATC ACGTCAGCGT 
CGGAGAGAAT CGAGACGACC GATACTTGGT TATCTCCATA TACGCCGACG GCTTTGATCA 
TTTGCCAAAC ATAGAGAAAC CGTTGAAATT TTCGGTTCAT CGCTATAAGC CATGGTATTG 
TCGAAGTATG ACCTTGGATA TGGGAGTAGA ATCAACAGTA TCGGATGTTC AGCAGGAAAT 
GGCTGTACAA GCACGGGCAG AGCAGCTGGC TCGCCAGTCT ATTCAGAAGC TAATTGACCA 
ACCTGGATGC TGTTTGCGCG ATGGCATCGA TTCGATGGAT TTCAGAATCT GGGCGAACAA 
AGATCTCTCA GGGGTCGAAC CCCCTGCTGT ATGGGACTCT AGCATGCGAA AGAGCGAATG 
GACTCTGGTC GACACACCTT CGAAAATGAG AGCCTGCATA AGTGAACTTT CGCAATCTCC 
TCCCTTGGCA CTTGCTTTTG ATGTTGAGTC ATACAACAAA TCGAAATACA CTCAGCTGAC 
TTGCTTGCTG CAGCTTTCGA CCGATCATGG TATGGCGTAC GTTATTGACC CTCTCGCACC 
TGGTGTTTTT GAAGAAGTCG GGGGACTGGC ACCGATATTT GCGGATCCGG ACATTGTCAA 
GGTTGGACAT TCCATTGGTG GACTTGATGT ACGGTCTCTC CATCGCGATT TCGGAATCTT 
TGTCATCAAT GCTTTCGACA CTTACGAAGC CGCGAAAGTC TTGTGTCTAG AATCGCATGG 
GCTCGCTGCA GTTTGCGAAC ACTACGGCAT GAAATATACG GATCTTTACA AAAGTTTGAA 
AAACGAATAT CAGACCTGCG ATTGGAGAGC TCGTCCGCTG ACAGGGCCAA TGATACAGTA 
CGGTAGATTT GACGTCCACT TTTTGATTGA GCTGCGAATG CTTATGATTC GTGATTTGAC 
GAAGACCTAC CTGTTTGAAA TAAAGCCGGC GGAGGAATTA CATGAATCTC GCATGGTTGC 
TGATACCCTA GCAGCAATCA ATTCTATGGC AATCGTAAAA ATGGAAGAGC AAGGTATCGG 
TCCGCCAAGT TCCAATGCAG CAGAGTCGAC TTGTCATGGT CTTGCCAGTG ACGATTTCAT 
AGAACCTTTA AACCTAGAAT CGGACCGCAA GAATGATAAT TGGTTGGTCG AGGGCAACCA 
CTTTCAGCCG CAAGTTGATG ACGAAACCTC ATTCCCACCT ACATGGAGTA ATCGACCAAG 
GACAGCTAGC ACCGAGAGCA GTAGCTCAAG TGATGAAAGA AAGTCATCAC TTAGTGAAAT 
CTCGAACGCG AGCGCCGCTG TACTTCGCTT GCAAGCCTCT CTGATGAAAG TGCTTTCATG 
GAGCCAACTT AGATGCAAGG ATCTATGGTC TGATCGGAAG GAACCTTTTT TGAAACAGAA 
AGATTTTCTG TCGCTCCTCC AGCGCGCGCG GCGAAATGAG GTGCACTTTG GAGATTCTCA 
GATTGCACTG TATGAAGAAC TGGTAGCCTG GCGTGACCGT GTCGCAACGC GTTTAGAATG 
CTTATCTGGG TTTGTCGCCC CTTTGGAGCT ACTAGTCGTT ATTTCGTGGC AACGACCGAC 
GTGCGAAGAA AGTTTGCGCC GCATTACTTA CTACTTGCCG GATGTTTTGG CGGAGCATGC 
TGGGCTTGTC CAGGAGATGC TCTTCTCCGT TCGACGATCA CTCCAGGGCG ACGGATTCGA 
CCCGGAGGCT AGTAAAGTTT ATTGGTATGC TGGGCAAAAC AAGCCGCCAT CTCGGATTTC 
AAAGGTGGAG CTTTCACCT 

 

Protein sequence

MGRWRRKNRF KAKPKGDSAT GFNTSWSWKE RGDLIRYLKT YRQHAERVSD GTYDAESLSM 
KKSFVRTIGV VEMPVLDQRN VSAPYLALPR TLSSKQRLAV HESCVEANLY HVSVGENRDD 
RYLVISIYAD GFDHLPNIEK PLKFSVHRYK PWYCRSMTLD MGVESTVSDV QQEMAVQARA 
EQLARQSIQK LIDQPGCCLR DGIDSMDFRI WANKDLSGVE PPAVWDSSMR KSEWTLVDTP 
SKMRACISEL SQSPPLALAF DVESYNKSKY TQLTCLLQLS TDHGMAYVID PLAPGVFEEV 
GGLAPIFADP DIVKVGHSIG GLDVRSLHRD FGIFVINAFD TYEAAKVLCL ESHGLAAVCE 
HYGMKYTDLY KSLKNEYQTC DWRARPLTGP MIQYGRFDVH FLIELRMLMI RDLTKTYLFE 
IKPAEELHES RMVADTLAAI NSMAIVKMEE QGIGPPSSNA AESTCHGLAS DDFIEPLNLE 
SDRKNDNWLV EGNHFQPQVD DETSFPPTWS NRPRTASTES SSSSDERKSS LSEISNASAA 
VLRLQASLMK VLSWSQLRCK DLWSDRKEPF LKQKDFLSLL QRARRNEVHF GDSQIALYEE 
LVAWRDRVAT RLECLSGFVA PLELLVVISW QRPTCEESLR RITYYLPDVL AEHAGLVQEM 
LFSVRRSLQG DGFDPEASKV YWYAGQNKPP SRISKVELSP