Gene PHATRDRAFT_45676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45676 
Symbol 
ID7200459 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp901805 
End bp902801 
Gene Length997 bp 
Protein Length308 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179936 
Protein GI219118318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATG CGGTCCCATC ACCTTTTCGG AGCAGTGTCG CATTTAATAT AGCACCCGAG 
ATGCCCGCTG GCGACGATGA TGCGACTGCA CGACCGCATC AACATACTCG GTTGAGAAGC
TGCATTTTCT TTGTTATGGG CATTTTGCTT GCTCTAGTTG TTTTCGATTC AATGAAGGAA
AAAAGAATCG AGAGAACAGC AGCCTCATTC TTTACATGGA TCGAATCTCA CCCTTTCCTT
GGCGTGCTGG CTGTGATCTT GGTTTACACG GCGGCAACAA TTTGCTTTGT GCCGGGATCC
GTTCTAACGA TAGGAACTGG ATTTGCATTC CGAAGCGCTT TTGATGATTT CGGTAAAGGA
CTTGCGCTTT CTTCCCTGGT TAGTATCTTC TCCAATTGTC TCGGTATCAC ATTACTATTG
CTCATCAATT TGTTCTTCGT TATGCCAGGC TGTTTTTGTT GGAGCCAGTT GTGGATCGGT
CTGCTCGTTT CTTTTAGGGA GATATTTGTT TCGAGAATGG GTAGTACGAC TGGCCTCTTC
GTATCCTATA TTTCGTGCCA TTGATAGAGC GCTGGAAAAC AATGGGCTAA AAATAATGGT
GCTGCTCCGG TTGTCACCGC TCATCCCATA CAACGCTCTC GACTACATTA GTGGGGTGAC
GTCTATCTCG TTATTTTCGT ACAGTGTAGC GCTCGTTGGA TTACTACCTG GAACGATTAC
ATTTTGCGCC ATTGGTGCCA CAGCTTCGAG CCTAGCAGAA GGCACCGATC GCAGTGAAAA
CGGGGGTCTG CGAGTATTCG CATTAGTCTT TGGGTTGATT TTCGCCTTTT TGGGAGCCGG
GGTCGCGTCT TTTTACTCTA AAATTGAACT TGATATGATT TTACAGGACG AATCAGAAGG
AACGGTACCG ATTGTCGCGC CGGATAGTGA GGAAGAACAA TACGTTCGCC ATGCTGGCCG
CTTCAGTGAT CATCCTATTG AAGAAGGGAT TGTATAA
 
Protein sequence
MSNAVPSPFR SSVAFNIAPE MPAGDDDATA RPHQHTRLRS CIFFVMGILL ALVVFDSMKE 
KRIERTAASF FTWIESHPFL GVLAVILVYT AATICFVPGS VLTIGTGFAF RSAFDDFGKG
LALSSLAVFV GASCGSVCSF LLGRYLFREW VVRLASSYPI FRAIDRALEN NGLKIMVLLR
LSPLIPYNAL DYISGVTSIS LFSYSVALVG LLPGTITFCA IGATASSLAE GTDRSENGGL
RVFALVFGLI FAFLGAGVAS FYSKIELDMI LQDESEGTVP IVAPDSEEEQ YVRHAGRFSD
HPIEEGIV