| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45579 |
|---|
| Symbol | |
|---|
| ID | 7200363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | + |
|---|
| Start bp | 598774 |
|---|
| End bp | 600066 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179680 |
|---|
| Protein GI | 219117783 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTCTGTCGTT TTGAGAGGTT CGTTCACCCC TACGGAACAC ACATTGTCAG GAATTAGCCG
CAACAACACC AACCTTTCGC TCTCTCTCTA GTGGCAGGCA ATGGCTCGAG TCCTTCGGGT
AGCCGCCGCA TGGTGGAGTC TGACGGCAGT GAACGGCTTT CAATCCACGG TGCCGCAAAG
CACGACCCGA CCAATCGTTC ACGCCCCCAG AACCTCTGAT ACTGTCCTCG GGGCGTCGTT
GTCGTCCACG CCGGAAAACA AAAAGAACCA GCCATCCACC ATACAGACTC CATACAACGA
GACGGGGAAA CTCGGCAAAC TGGAACGCGT CGCACTGCTC GTTTGTCCGG CCCAATTCTG
CGTCCCGGAT GATTACGCCG TACTCTTTGA GAATTTGCGA GCGTTGTCGT CGGACGACGC
GGCGACCCTG GCTTGGCCAA GGATCGGAAC CTGCGTGGTG GCTCCACTTC CACGGACCGA
GTGGATCCGT GTCGCACGCC AGCTCCCGAC TCGAGCCTTT TGGGACGCCC GTTTGCCCGT
CCATTCGACC CTCGATTGGT ACTTTGACGC TATCGAAAAG GGACTCGCGC AAATATTTGC
ACAAGAAGGG GAAGATGTTC GGATCTGCAT TGTGGGACAC TCCATTGGAG GTTGGGTTGC
CCGTGCTTAT CTGGGTGGAT TGGGGCGGAC CAGTTCGGCT GTTTATCGGT TGGCCTCGAC
ACAGGTATCG TCCTTGATCA CTTTAGGCAC TCCGCACGTT TCTCCCGAGC TGGCCTTGGT
CGATCAAACT CGAGGATTGT TGCGGGAGAT CGCCGACGCC GAATCCTGTA GTCCCGAAAC
TTTGGCCGCC CGTGGGATCG ACGTGACGTG TGTCTGCAGC CAAGGACTAG ACGGCAATTT
CTGGACGACA AATGTGGAAG AACTCGTAGC CGCTAGTTCG TACTGGCCCT TATCGGGATC
CTTCCGGGGA GCCGGCGACG GCATTGTGCC TTTGAGTCTG GCATTTATGG AAGAACCGTC
ACGCCGGATT GTTGTGGAGT CTTGCGGTGC CACCATGCTA CCCGTCCGAC ATTCCCACGT
CGTCCCCACA CCGTGGAATC TATGGAACGG GTACGCCCCC TCCATTATAT TACCCGACAC
CACCTTCCCT TCCTACGTAT CTAAAGGTGT TGTGGCTCAA TGGGCGCAAT ACATTCGGTG
ACGAACAGGT GTCTAAACAT TTAGAGAGAA AAATCACAAA TTAAAAAGTA ACCAACTACC
ATGGTTGCGC CCCCTGGCGG CGCACCTATA CTG
|
|---|
| Protein sequence | MARVLRVAAA WWSLTAVNGF QSTVPQSTTR PIVHAPRTSD TVLGASLSST PENKKNQPST
IQTPYNETGK LGKLERVALL VCPAQFCVPD DYAVLFENLR ALSSDDAATL AWPRIGTCVV
APLPRTEWIR VARQLPTRAF WDARLPVHST LDWYFDAIEK GLAQIFAQEG EDVRICIVGH
SIGGWVARAY LGGLGRTSSA VYRLASTQVS SLITLGTPHV SPELALVDQT RGLLREIADA
ESCSPETLAA RGIDVTCVCS QGLDGNFWTT NVEELVAASS YWPLSGSFRG AGDGIVPLSL
AFMEEPSRRI VVESCGATML PVRHSHVVPT PWNLWNGYAP SIILPDTTFP SYVSKGVVAQ
WAQYIR
|
|---|
| |