Gene PHATRDRAFT_45518 details

Gene Information

• Locus tag: PHATRDRAFT_45518
• ID: 7200597
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 422181
• End bp: 425391
• Gene Length: 3211 bp
• Protein Length: 918 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002179642
• Protein GI: 219117704

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGTTGCAAAA CATGAAGCTC TCCATCGGAG GATGGGAATG GAAGAAGAAA GAAGGGACCT 
ACAAGAAGGA AGTGTCAAAC AAGGAAGGAA ACAAACTCAC CAACACATCG TCAGCCACCG 
AAAGAATTCT AGAGAGAAAT AGCATTATAC AATGAGCTTC TTCTGGACTT CCTCGATCAC 
AAACGAACCT GAGAATTCCT TGGATACCGG TGTCACTGTC AGCAATTCGA GACCATCGTC 
ATCGCTGCAA CAGCAGAACA AGAATATAAA GGAACGATTT GGAGGAATCG AGACAGAATC 
CCGTCAAGTT CCATTCTTGC CTGACGAAAA CTTGACTATT GAATCAATAT ACGACTTTTA 
TGTGCATACA CTATTCCCTG CTGTGATGAG TTCTTTGCCT TTATTGGGTC GTCGCCTTTT 
CCATGACACG CAATCGGTAC TTCATGATAG TTTTCAACGT TTTGTAAACT TTATTCTTCC 
GGACTATTGG ACGTCTTCCT CCTCATACTC ACATCCGCAG CTACCAAGCT TTCGGCGGAT 
TTGGGAAGAA AACGCCGCTG ACCTGTCCGT TTCCGACTTT TTGCTCCGAC ATTTCGATAC 
CAACCACGAC GGCAAGATAT CTCCCGAGGA ACTCTTTCAC GTGGACGAGA TGCTACTCTC 
TCGCATACTA CCTCGCTCAG ACGAAAGTTG GTGGAGCTGG TTCTCCCGCG AATGGCCCCT 
GTTGGATTGG AAAGTGGGAC TTTTCTTGTG GCGCACTTTT GGTGGCGTGC TCTTAACCCT 
GGCCGTTTTA TCGATTGTAC CGGGACGGTT GCATGGCTGG TCGGCTCGTG TCTTGCGATG 
GCCCATTCTC GGACTCACTT ACTTTCTCAT CGCCGTTGAA CTTATGGTCT ATATCGTAAT 
TCGCATTTTC ATTCGGATTG CCGAATACAT AATCGCACGG CCCAAGCATC GAGCACTGCG 
CCAACAAATG GCTAAATCCC AGTCCTATGA AGAGTGGTAC GGCTACGCAG AAGATTTGGA 
CAGATCACAG AAACGAGATG TATGGATTCG ACGAATCAAA GATCAAACAT CTTTTCACTA 
CAATTGGAGC TTTGTTCAGG ACCTCATTCG GGATTTGCGT AACGCTCGCG AGCAAGGCGA 
CTCCATACTA GCGCTTGCCG TTATTCAACA ATGCACGCGG AAAAATGTAG GCGGTATTAT 
GAGCGAAGAT TTATTTTCAT ATACGAATAC GGGGGAACCG AAAGCAGTCG TACGGGAGTT 
CATCGAGGAA GCTGTCCAAA CCTTGCACTG GCTCACTGAT GAAGCATTGC ATATTCCAGT 
AGATGATTCC GCACAACAGC AAAGCAACGA AAAACGCACC TATGAAGAGC AAATGGAAGA 
AACTGTTCAA GCCGAAAAGG ACAAAATATG GAAATCATTG ACCAATTTGT TTGGTAATGG 
CGAAGATGGA AAACAAAATG ACGATGTCAA GACGAAAGAT GGAAATGAAA CGCATTCGCC 
GGAATCCGCC CCCCACCAAG ACATAGAAAG TCGGACGGAT AATCCTTTGC CATCCTTTCA 
CCGACAAGAG GTTTTAACGT TTTTGAAGCG GGCTCGAGCA GCTTACGGTC GAACCGCTTT 
GTGCCTGAGC GGTGGAGCGA TGATGGGAGT TTATCATTTT GGACACGTTC GGGCTCTACT 
GGAAACTGGT TCTCTGCCCA ATATTGTACG TACCGGGATC GTGTTTTTAG ATCACACACT 
CGTTACAAAT AGGAAACTTT GTATTTATGT GCGACAACGC CTGATGTTTG TTTGCTTCTT 
TTTTGTGAAA AGATTTCAGG AACTAGCGCA GGAAGCATTA TTGGTGCGAT TTTGTGCACC 
AGGAAGGACG ATGAATTGGA TCGTGATTTA CGCCCAGAAA TTTTAGTACA TAAGCTTACG 
TGCTTTTCGC GTCCTTGGAG GGAGAGGATC TCTAGCCTTG TCAAAACCGG GAGCATGTTT 
GATGTCGATG AATGGTTGGA GCTACTGAAA TGGTGAGTTA CTTGCTGCTG CTTGTTTGCA 
TCCCTATACG TCAGGTCGTT CTTGTCTCAC CGTCATGTTT ATAAGGTTTT GTCGGGGTGA 
TATGACATTT GCTGAAGCAT ATCGTTTGAC AGGGCGCGTT TTTTGTATTA CTCTATCCCC 
TACTACGAAG AAGGCGCCGC CGGTGTTGAT AAATTATTTG TCTGCGCCCA ACGTTACGAT 
AGCCTCTGCT GTCGTAGCGA GTGCAGCTGT ACCTGGGTTT GTTGCGCCTG TTCGCTTGCG 
TATCAAGGAC ACCAATGGCG TAGTTCAGAG AGGCGGAGCA AAGGACGAAG CATACTTTGA 
TGGATCGATC AAACAAGACA TTCCGACTAC AGGATTAGCG GAGATGCTCA ATTGCCAGTT 
TTTTGTCACG GCTCAATGCA ATCCACATAT TGTTCCAATG TTTTACAACA GTAAAGGCGG 
AGTTGGGCGT CCCAGCCGAT GGTCCAGTGG AGCACAAGAA GATTCCTGGA GAGGCGGGTT 
CCTACTGGCC GCGTTGGAGA TGTATCTCAA GAATGACATG AAAGCCAAGT TTGTTTTTCT 
TCGTGATCTA GAGGCGGCTG TTGGCTTTAC ATCGGAGCTA CTGACGCAAG ACTTTGTAGG 
CACGACAACC ATCGTACCTC AAGTTTCCTT TAAGGATTAT TTCGGAGTAA GGACAAGCGC 
AAATGAGATG TGTTGCCCAA ACAATCGCAT GAAAAACTAA CTGCTTCTTT CTGTTCGTTC 
GTTCGCAGCT CTTTGAGAAT CCGTCTTTGG AGCAACTCCA GCGGTGCTGT CATGCAGGAT 
CTGTTGCTGC GTACGAACAT ACTGTTATGA TCCAGATGCA TTACAGCATT TCGGATGCAC 
TGGAGGAATG CATTGCAAAG CTTGAAACCA ATAAGCGCAA AGTACATATT CGGCGACGTA 
CAAAGCTAGG ATCGGCGAGT ATGACGAGAG GCGATCCAAA GGGAGGGGTC GTGGAGGAAT 
CAACGGAAGC GCGAATCCAG CCAACAGTGG AAAATACCCA GACGTTTCTG GTCGGTGGGT 
TGACATCAGA CGGACTGAAA GTACGTACAG CGTTCAATGA ATCATCGGAT GATACAGATC 
GAGAATCGGA GTACGATGAG TTCGAAGCTG ATTGGACGGA CCTTAAGTAA AAATTGCATC 
GGCTTTAAAA TACAAAGAAA GTTGAACTGT T 

 

Protein sequence

MSFFWTSSIT NEPENSLDTG VTVSNSRPSS SLQQQNKNIK ERFGGIETES RQVPFLPDEN 
LTIESIYDFY VHTLFPAVMS SLPLLGRRLF HDTQSVLHDS FQRFVNFILP DYWTSSSSYS 
HPQLPSFRRI WEENAADLSV SDFLLRHFDT NHDGKISPEE LFHVDEMLLS RILPRSDESW 
WSWFSREWPL LDWKVGLFLW RTFGGVLLTL AVLSIVPGRL HGWSARVLRW PILGLTYFLI 
AVELMVYIVI RIFIRIAEYI IARPKHRALR QQMAKSQSYE EWYGYAEDLD RSQKRDVWIR 
RIKDQTSFHY NWSFVQDLIR DLRNAREQGD SILALAVIQQ CTRKNVGGIM SEDLFSYTNT 
GEPKAVVREF IEEAVQTLHW LTDEALHIPV DDSAQQQSNE KRTYEEQMEE TVQAEKDKIW 
KSLTNLFGNG EDGKQNDDVK TKDGNETHSP ESAPHQDIES RTDNPLPSFH RQEVLTFLKR 
ARAAYGRTAL CLSGGAMMGV YHFGHVRALL ETGSLPNIIS GTSAGSIIGA ILCTRKDDEL 
DRDLRPEILV HKLTCFSRPW RERISSLVKT GSMFDVDEWL ELLKWFCRGD MTFAEAYRLT 
GRVFCITLSP TTKKAPPVLI NYLSAPNVTI ASAVVASAAV PGFVAPVRLR IKDTNGVVQR 
GGAKDEAYFD GSIKQDIPTT GLAEMLNCQF FVTAQCNPHI VPMFYNSKGG VGRPSRWSSG 
AQEDSWRGGF LLAALEMYLK NDMKAKFVFL RDLEAAVGFT SELLTQDFVG TTTIVPQVSF 
KDYFGLFENP SLEQLQRCCH AGSVAAYEHT VMIQMHYSIS DALEECIAKL ETNKRKVHIR 
RRTKLGSASM TRGDPKGGVV EESTEARIQP TVENTQTFLV GGLTSDGLKV RTAFNESSDD 
TDRESEYDEF EADWTDLK