Gene PHATRDRAFT_45413 details

Gene Information

• Locus tag: PHATRDRAFT_45413
• ID: 7200505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 89696
• End bp: 90486
• Gene Length: 791 bp
• Protein Length: 175 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002179576
• Protein GI: 219117566

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000791095
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGCGGT CGGTCTTCTC CGGAACCTGG CACTGGCAAT GGACGGCACG TCGTCTACAA 
ACCCTCATGA ACTGGTATCC ACCCTTTGTG GGAGCCGGTG TAAAGGTCGT CACCCTCGCC 
AACGACTTTC GGTACGCCAA GGTACAAATG CCTCTCACTT GGTACAATCG CAACATTGTG 
GGCGTACACT TTGGGGGCAG TCTCTATGCC ATGTGCGATC CCGTTTACAT GCTCCTACTC 
ATGCACGCAC TCAACGACAC GAACCGACAC GGTCCCCACG AATTCGTAGT CTGGGACCAG 
GCCGCGTCCA TCCAATATTT ACAACCGGGA CGGGGAACCG TGACGGCCGA ATTCATTCTC 
AATGACGCGT TGCTCCAACG TATACAAACA ATGGAACCCG GGACGAAACA AACGTTGGAT 
TTGGGGGTCG ACGTCCGCGA CGAAGCCGGG AACGTGGTGG CTCGACTGGT CAAAACGGAA 
TATATTCGAC GACTACGTAT GCCGCTTCGA CCCAATACCC AATCGTGAGA CTGGACTATT 
CTGATTGACA ACAATTCCGA GCCCTTGGGG ATTGCCCGGG CCACAATAAG GGTCCGTTTC 
GTGTGATTAG CGATTTGGAA ACCCTCGGAC CAATGCTACA CGGAAACGAA ACGTCGTGTG 
GCTTGGCTGC GGTGTGCCCA TGGTCACGGT ATCACTAGTC CGAGACGAAG TTTCGTGTCG 
ATGGCCTAGT TGTAGCCACA GTGGTTGGTA GTTAGGTAGG TAGGTAGGTA GGTATACTTC 
TTTTCTCTCT T 

 

Protein sequence

MLRSVFSGTW HWQWTARRLQ TLMNWYPPFV GAGVKVVTLA NDFRYAKVQM PLTWYNRNIV 
GVHFGGSLYA MCDPVYMLLL MHALNDTNRH GPHEFVVWDQ AASIQYLQPG RGTVTAEFIL 
NDALLQRIQT MEPGTKQTLD LGVDVRDEAG NVVARLVKTE YIRRLRMPLR PNTQS