| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45412 |
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| Symbol | |
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| ID | 7200504 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | - |
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| Start bp | 86870 |
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| End bp | 88780 |
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| Gene Length | 1911 bp |
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| Protein Length | 500 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179789 |
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| Protein GI | 219118011 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0911606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTATCGCGCC ATTCCAGACA ACGAGACGTA CTGTTCATCC AATTCGTCCG ACACTCCAAC
ACTTACGTAC AGCCCAACAC TCACTTACGG TTAGTGACTC GCCTTTCTCC ACCCCCCGGC
ATTGCCGCAT TGCACACACC ATGGGACGCG AGGGGACCAC GACACGATGG GTCCGATTCC
TACGGGGACT GTTCAGCTTG TGGGTTTGTT CGAGTCGTTG TCGTCCTTTC TACCTAGTGT
CCGGATGTAC ATCCGGAGCG TCGCTGCCGG ACGAAACGTC GGCCCGTCAC CTCGTCTCCC
CACACCACAC CTCTTACCCT CCCCACCAAC CCGCTTGTCC TACGGAACCA CTCCACGCCT
CCGAAGTCGA CGCCACAACG GTCCGTGTCC AAGCATGGAC GGATCGAAAC GGACACCGCA
ATCTACAAAC CGCCGCACCC ATTCCCATTC CCGTCTACGT CACCTACATT TCCCCTCCCA
ACACGACGCC TTTCAATCCC GTGGAACAGC GCTACTTCGA GATTGCCGTC AATCTACTCA
ATCGCGATTT CCACAGCACG CCTTTTGTCT TTCGGTTGGA ACGTTTCCAC GCGGTGGACG
CCCCGCAGTG GCGGGCGTGT CCCTTTGCGT CGCCGTCCAC GGCCGCCATG ACGCAAGCCC
TGCACCAGGG CGGCACCGAC GCCCTCAACG TCTACGTCTG TCGTCCCGCG GCCTTTTCCG
GATGGTCCAC ACTCCCGCAG TGGCTCGATC TCGACTTTTG GGATCGACGA CAAGACGGTA
TCGTCCTGGC CGAACAAGCC GTCGTGGGAG TGGGGAATCC CTCCTGGCGG AACACCTTGA
CGCACGAAGT CGGACACTGG CTCGGACTCT TTCATACCTT TGAAAATGGT TGTCGCGCTC
CCGGAGATGG AGGTACGTAG CGGTAGAGCG ACTCGGCTGC CGGGGTACAC ACAGTAGTAG
AGTACCAATG TACACACACT ACAATACATG TTTTTGTATA CTTACACACA ATCTCATTTA
TATACTCTCA CAATCTCATT TATATACTCT CACGCTCCAG TGAACGATAC CGCCGCCGTG
GCACAGCCTT CCTACAGCTG TAACGGGAAT ACCAATACTT GTCCGGATGA CGATCCAACC
ATTGATGCCG GTGTGGATCC ACTCGAGAAT TGGATGGATT ACAGTACGTG CCCGCATCCA
CACGCGACTC TCGTTCCGTG TCGAGTCACG CCACTGTCGA GAAGCCTTCC TCTCACACGC
GCGCCCGTTG CGTCTCTTTT TTTTTTTTTA CACCATTCCG TAGCACACTA CGGTAATTGT
GCCAATAGTT TTACTCCCGG TCAAATTACC CGCATGGTGG CCATGTTTGA AGAATTTCGG
ACTCTAGATC CCACCAACCA CACGACCGAC CCGGTAGTGG TCAACAACGC TGCCCCGGTT
CCGTCCCCTT CCACCATGGC TCCCAGTATG GACCACGTTT CTTCCACCAA TGCCACTATT
CCCACGACTC CACCCGTGCC TTCCACCACC CATACAGCCA CGGCCCGTCC CAGTACGGCA
CCCGTCCCAG CCACCATGAC CACTACTCCC ACCACCGTAT CCCTCCCTTC CATTGCGCCC
ACTCCGCTCT GCACACCGCC TTATCAGTTC TGCAACGTGG CGGCCGGCGC CGTGTGTTGT
CGCGAGACGT TGTCGGCCGA CCCTTTTACC GTCTTTTACG CCTGCTTGCA AAACACCTGC
GTCCCGGCTC AACGCAAATC ACGCGTGCCG GAAAAGGACG GTTTGCGGGA CCGCGCGGTC
GATGACGTGG ACCGGATGGA CACGTCGCGG GGTGCCACTC CGACGGTGGC GGTGGGCACC
ATCCGGGGGG GACCCCGGCG GTTGCGGTCT CCACGAGACG GCGTGCAATG A
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| Protein sequence | MGREGTTTRW VRFLRGLFSL WVCSSRCRPF YLVSGCTSGA SLPDETSARH LVSPHHTSYP
PHQPACPTEP LHASEVDATT VRVQAWTDRN GHRNLQTAAP IPIPVYVTYI SPPNTTPFNP
VEQRYFEIAV NLLNRDFHST PFVFRLERFH AVDAPQWRAC PFASPSTAAM TQALHQGGTD
ALNVYVCRPA AFSGWSTLPQ WLDLDFWDRR QDGIVLAEQA VVGVGNPSWR NTLTHEVGHW
LGLFHTFENG CRAPGDGVND TAAVAQPSYS CNGNTNTCPD DDPTIDAGVD PLENWMDYTH
YGNCANSFTP GQITRMVAMF EEFRTLDPTN HTTDPVVVNN AAPVPSPSTM APSMDHVSST
NATIPTTPPV PSTTHTATAR PSTAPVPATM TTTPTTVSLP SIAPTPLCTP PYQFCNVAAG
AVCCRETLSA DPFTVFYACL QNTCVPAQRK SRVPEKDGLR DRAVDDVDRM DTSRGATPTV
AVGTIRGGPR RLRSPRDGVQ
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