Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35318 |
Symbol | |
ID | 7200367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 620483 |
End bp | 621466 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179880 |
Protein GI | 219118201 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTCAAT TGCAGAGCTG GCTACGGTAC TGCACTCTGT GCTTCTTTTT CACCTTTTCT CTGACCTCCG CCCGATTCCG CTCGACCAGT GCAGCGTTGC GGGTGCAGGG TGGAAGCTTG ACTTTTGGGG GCGAAGGTTC GCCGTTTGAA GCCAATCCGC ATTACAGTCC ATCCCCTCGG CAATATGGCA AGCGTCCGAT GTTACTGGGA GACGTCCCGG ATCCTTCGGA ACCCAACAAC GGGGGATTTT ATATCGAAGC ACAAACATTC ACGTACACCA ACAAACCGAT GTCACTACTG GAGCGATTCC AGCGGTATGC CTCAACGCTG CATGAAAGCA GTCCGTCAGT GTCGATTGTT AGCTGGGCTA GCTTGGCAGT CTTCATGCTT TGGAGAGTCC CAGCCGTACG GCCTATTTTG CAGAAACATT TCGTGGTCAA CAGACTAAAC TTACAAAGCG GTCGATTGCT CACGCTGTTT CTCTCTTCCG TTTCCCACAT TGGCTTCTAT CATCTTGCCG TTAATATAGC GGCACTATTA TCTCTGGGAC CAGTCGTCCA GCGAATGTTG TTCAGCCAAT CACGATGGCC ACTCTGGCCT CTTATAGTTG GAGCCGCAAG TGTCAGTTCA GTCGCCTTTC TGGCTTTGGA CCGAAGCGGC CAAGGAAGTT GTTTGGGACT GTCCGGAGTG ACAGTCGCTC TATTGGCAGT ATTCGCAAGA ATGTATCCCA CTCATGTATT GGGCATCTTG TTGGCTGGTG TGATTCCTAT ACGCTTGCAA GCGAGCCAAT TGCTGCAGCT CGTGTTCATC TGGAGCTTGT TTGGTAGCGT TGCCCAGATA CATTCCCAAG TGGCCCATTC GGCCCACCTT GGAGGCATTC TGTTTGGACT GGCGTACTGC GAAGTCTGGA AACGTCGATT TTTCCTGCGA CCATACATTG CGCAATTTCT CGTCCGGTTC CGGAGGAAAC ACAGGCGATT GTAA
|
Protein sequence | MLQLQSWLRY CTLCFFFTFS LTSARFRSTS AALRVQGGSL TFGGEGSPFE ANPHYSPSPR QYGKRPMLLG DVPDPSEPNN GGFYIEAQTF TYTNKPMSLL ERFQRYASTL HESSPSVSIV SWASLAVFML WRVPAVRPIL QKHFVVNRLN LQSGRLLTLF LSSVSHIGFY HLAVNIAALL SLGPVVQRML FSQSRWPLWP LIVGAASVSS VAFLALDRSG QGSCLGLSGV TVALLAVFAR MYPTHVLGIL LAGVIPIRLQ ASQLLQLVFI WSLFGSVAQI HSQVAHSAHL GGILFGLAYC EVWKRRFFLR PYIAQFLVRF RRKHRRL
|
| |