Gene PHATRDRAFT_3015 details

Gene Information

• Locus tag: PHATRDRAFT_3015
• ID: 7200503
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 83330
• End bp: 84028
• Gene Length: 699 bp
• Protein Length: 233 aa
• GC content: 60%
• Product: predicted protein
• Protein accession: XP_002179575
• Protein GI: 219117564

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.420944
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TACGTCTTGG CGCCCATGGT GGATCAGTCC GATTTGCCCT TTCGTTTGCT CTGTCGTTCC 
TACGGCACCA ATTTGTGCTT TACGCCCATG ATACACGCCC GCTTGTTCAC TACCAACGTA 
GAGTACCGTC GCAAGTTTAC ACTACAATAC GGACCGCCGC AGGATCGTCC CCTCATTGCC 
CAAATATGCG GTGGCGACGT CCAAGCCGTG GTCGCCTGCG CCCTCGCCAT GCAACCCTAC 
TGCGACGGCA TCGACATTAA CTGCGGCTGT CCCCAGAATA TTGCCAAACG GGGCAATTAC 
GGAGCCTTTC TGCTGGAACA AGAAGACGTA CTCCTACCCT TGGTACATAC CCTACTCCAA 
CACTTGTCCG TCCCACTCTC GGTCAAGGTA CGACTCCTCC CCGCCGAAAC TCGTCAGGCC 
TCTCTGGAAG CTTCCCTCCG ACTCTACACC AAACTAGTCG ACGCCGGGGT ACACTTGCTC 
ACTATTCACG GCCGTACCCG TCACCACAAA GGTCCGCTCA CCGGGGCCGC CGACTGGGAC 
GCCATTCGCG TCGTCGTCGA CCGCCTCGGC CAACGGATAC CCATCTTTGC CAACGGCGGC 
GTCGCCTCGC TCCGCGACGC CCAAGCGTGC CTCGCAACGA CCCACGCCGA CGGCGTCATG 
AGCAGCGAAG CCCTGCTCGA GTACCCCGCG CTCTTTGCC 

 

Protein sequence

YVLAPMVDQS DLPFRLLCRS YGTNLCFTPM IHARLFTTNV EYRRKFTLQY GPPQDRPLIA 
QICGGDVQAV VACALAMQPY CDGIDINCGC PQNIAKRGNY GAFLLEQEDV LLPLVHTLLQ 
HLSVPLSVKV RLLPAETRQA SLEASLRLYT KLVDAGVHLL TIHGRTRHHK GPLTGAADWD 
AIRVVVDRLG QRIPIFANGG VASLRDAQAC LATTHADGVM SSEALLEYPA LFA