Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_27234 |
Symbol | |
ID | 7200442 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 831162 |
End bp | 832556 |
Gene Length | 1395 bp |
Protein Length | 363 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179726 |
Protein GI | 219117879 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CATGCATCAG GTGTGCACTA ACGCAGTCTC GTGCTGTTCT CATGTCCTGT GTTCATACGA AAGATAGAGC GATAGGTGTA TTTGTCATTT CGATTAGAAA TAATTGGCTT CGAGGCTGCA GGATCCTCGA ACTTTTTCAC TTGTCTGCGA CTTTTTCAAA CTATGATAGG AGGTCGCGCC AGCTTGAGGG GTACAGGTAG ATCGCCTTTC TATCGCGGTG GACAAAGCGG TCGTGGAAGA GGCCGAGGAT GGGGAAGGGG TCGTGGAGTG CGGTATTTAA ATAGAGGAAG TTCTAGTCAG CGCGACGGAG GTGGAAACGA CGACATTGAA GAAATTGGCA TTCCTACCGA CTCGAGCATT TCTGTGGCTG TTGAAGGATG CTGCCATGGT GAGCTAGACA CAATTTACGA GCGATTGCAG CAGCACGAAG CAAAGAGTGG CCGAAAGGTG GACCTTTTGA TATCCTGTGG GGATTTCCAG TCACTACGGA ATTTAGCCGA TTTTCACAGT TTGGCCGTTC CCCCCAAATA CCGGGCTCTT GGTTCCTTCT ACAAATACTA TTCGGGCGAG AAAACGGCAC CAATCTTGAC CATTTTTGTT GGTGGTAACC ACGAGGCGTC ACAAGCCTTA CAGGAGCTTC CGTATGGAGG ATGGGTTGCT CCCAACATAT ACTATTTGGC TACTTCTATT GTAAGATATC AGGGAATTCG CATTGGTGGA ATCAGTGGTA TCCACAAAGC CCACGACTTT GCTGTTGGCA GATTCGAACG TCCACCATAC GATCGCTCTT CTCTTCGAAG TGTATATCAT GTAAGGAACG TCGACATTTA CCGTATGAAA TGCATATCCG ATTTGGATCC GATCGATATC ATTGTGAGTC ACGACTGGCC GCAAGGGATC GAGCAATACG GTGACACCAA TAGTCTCCTT CGACGAAAGC CTTTCTTCCG TGAGGAAATC GCGCAAAATT GTCTCGGGAG TCCCGGAAAT ATTGAGATCT TGCGTGCGTT GAAACCAAAA TGGTGGTTTG CCGCCCATCT ACACGTAAAG TTTCATGCGA CTGTCAAACA TGGCGCTATC AAAGCCGGAA ATGCTTCAAA AGATACCGTA ACCTCTCTTA TTCCGTCGCA GACCGTAGGA TTGACAACTC AAGAGCCGGT GGAAGCCGAG AATGAAGAGG AATCTAAGAC TCGCTTTCTA GGCTCTGAAT CAGTCGACCG TTGTAATACA AACGATTTGA CGGACCAAAT GACTCGCTTT CTGTCTTTGG ACAAGTGCTT ACCAAGGCGG CATTATATGT CTATTTTGCA CTTACCAGTA AAGGAGTGCA AAGACAATGC AAAGCTTGAG TACGATTTGG AATGGCTTGC TGTTGTTCGA AAAACACACA GTTTG
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Protein sequence | MIGGRASLRG TGRSPFYRGG QSGRGRGRGW GRGRGVRYLN RGSSSQRDGG GNDDIEEIGI PTDSSISVAV EGCCHGELDT IYERLQQHEA KSGRKVDLLI SCGDFQSLRN LADFHSLAVP PKYRALGSFY KYYSGEKTAP ILTIFVGGNH EASQALQELP YGGWVAPNIY YLATSIVRYQ GIRIGGISGI HKAHDFAVGR FERPPYDRSS LRSVYHVRNV DIYRMKCISD LDPIDIIVSH DWPQGIEQYG DTNSLLRRKP FFREEIAQNC LGSPGNIEIL RALKPKWWFA AHLHTRFLGS ESVDRCNTND LTDQMTRFLS LDKCLPRRHY MSILHLPVKE CKDNAKLEYD LEWLAVVRKT HSL
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