Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_27118 |
Symbol | UBI3 |
ID | 7200607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 467666 |
End bp | 468323 |
Gene Length | 658 bp |
Protein Length | 155 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | ubiquitin extension protein 3 |
Protein accession | XP_002179851 |
Protein GI | 219118140 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TCGAACCAAC ACCGCAAACA CTATTGTCTA GTTCTTCCTA GGCGTACAAC GATCGCCCCC CCCCCCCCCA TTCGTGTTCT TTTGGCTAGT AGCAATAGTA GTACTTGCGA CCAAGCAGTG ATCACATACA CACGCACAAA CACATTCATC ATGCAAATTT TCGTCAAAAC TCTGACGGGA AAGACCATCA CCCTTGATGT CGAACCCAGT GATACGATCG ACAACGTCAA AACTAAGATC CAGGACAAGG AAGGCATTCC TCCGGATCAG CAACGATTGA TCTTTGCTGG CAAGCAACTG GAAGATGGCC GTACACTGTC GGACTACAAC ATTCAGAAAG AATCCACCCT TCATTTGGTG CTTCGTCTAC GTGGAGGAGG TAAGAAACGT AAAAAGAAGG TCTACACCAA GCCCAAGAAG GTCAAGCGCG TCAATAAGAC CATTCCGTTG CAAACTCTCA AGTATTACCG GGTGGAATCG GACGGCAAGG TCACTCGCCT CCGAAAGTAC AGCCCCGTCG CTGGCATTGG ATGCTTCATG GCACAACACG TTGATCGTTA CTACTGTGGA AAGTCGGGAA CCACCTTCAT GTACGATGAT ATGAAGGAAA GCGAGTAAAA GCCATGTAAC GGGTCTTTAA TCTAGCACTT CTACAAAC
|
Protein sequence | MQIFVKTLTG KTITLDVEPS DTIDNVKTKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN IQKESTLHLV LRLRGGGKKR KKKVYTKPKK VKRVNKTIPL QTLKYYRVES DGKVTRLRKY SPVAGIGCFM AQHVDRYYCG KSGTTFMYDD MKESE
|
| |