Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_20124 |
Symbol | |
ID | 7200456 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 891304 |
End bp | 892846 |
Gene Length | 1543 bp |
Protein Length | 400 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179934 |
Protein GI | 219118313 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.902407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CATATTTTAA GAGGATCTAA CGCTGCAAAG CCTTTCAGTC GTAGAGGAAG TTTGTTGAGG AATGCATTTG TTACGCCCCT CACGGCATCC GCTAAAGCTC GGTCCGGTCC TGCGACAACA ATACCTAACA ACTCGTACAG CACCACGGAG ACTTCAACCG AACATGCACC TCGTCGCTAA CCTGCGCTCG GCCACGCTCA CGGGCGCTTC TTTGCATAGG ATCCGGTTGT ACTCGACCAC GACTGTCCAT AGCCTGGATA TTCTCGTGGA TCCTCGTGTC ATATCGCAGC CGAAACGAAA CGAAAAGAGC AAGAAATCCA ACAAACCTTC CTACCGCTTC GTGGATCGGG TCAGGGTCCA GGTTTCGGGA GGTGCCGGGG GAAAGGGGTC CCTTTCCTCC GAACAAATGC GCCGCCGACA TCATTTACGG CCGGATGGTG GGCACGGTGG TCATGGAGGT CAGGTCTTCC TCGTCGCCGA TCCGAGGGAG CAAACGCTGT CGTGGACGCA TCCACACGCG CAAGCGGAAA AGGGCACCAA CGGGTCGAGC AAGGAATGTT CCGGACGGAA AGGGGAAAAC CTGATTATAC GAGTTCCCTG TGGAGTTGTA GTGAAACGGA TATTGGATCC AGGAGATGAA TGGGACGAAG AGAGAAAACT GGTGAACCGG CCGTCGTGGA GTAGTGTCCA ACAGGCCAAT ATGGTGGAGG AAGAGAAAGA CTCAAGGGTA TGGGATGAAG CGGGTACAAA ACGCGAGAGT GAAAACGGTG ATTTGTCCGA TAGTGAGGAT GACGATGATG AAGAAGGGGA GCGCGATCTT CGCTTACTCC AGCAAGGCTT CGAGATTGAG GTTACTCCAG ACGGCTCAGC AGACGAACTA GCTGGGAATG AAGAAAGTCT TACCGATTCA GTACGACGCA CCGTGGTGAT TGCGGATTTG GATGAACCTG GTTCCTATGC TTTGGTGGCA CGGGGCGGCC AAGGAGGAAT TGGCTCGTCT TACTATGCGA GTGCACAGGG ACCTACTCCT GATGCGAAAA TCTTGATTCG TAAGGCCAAA CCAGAACCTG GTGAAATTGC CTTTCTGGAG CTGGAGCTCA AGCTCATCGC AGACATCGGG CTAGTTGGTT TCCCCAACGC TGGTAAGTCC AGTCTCCTAC ACGCTATGAG CCGAGCTTCG CCCGAGATTG CTCCCTATCC GTTTACCACA CTGCATCCCC TTATTGGATG TATTGAATAT CAGGATGGAT ACAGGATCCG AGCGGCTGAC ATTCCAGGTT TGATCGAAGG CGCATCTGAA GGCAGAGGTT GTGGACACGC CTTTTTGCGC CACATTGAAC GAACGAAGGC ACTCTTGTAC ATTGTCGATG CAGCAGGTAC AGACTTTCGG GATCCAGCGG AAGATTTGAA AATCTTAGCG AAAGAGTTGG AATCTTACGG TGACGGAAGC CTTCTGGAAC GACGTGCGCT AGTGGTTGCC AACAAGCTGG ATCTTTTGAC GGAAGAACAA GCCTTCGAGA TTCTCGAAGC GGTCGGGCAA GCT
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Protein sequence | MHLLRPSRHP LKLGPVLRQQ YLTTRTAPRR LQPNMHLVAN LRSATLTGAS LHRIRLYSTT TVHSLDILVD PRVISQPKRN EKSKKSNKPS YRFVDRVRVQ VSGGAGGKGS LSSEQMRRRH HLRPDGGHGG HGGQVFLVAD PREQTLSWTH PHAQAEKGTN GSSKECSGRK GENLIIRVPS GNEESLTDSV RRTVVIADLD EPGSYALVAR GGQGGIGSSY YASAQGPTPD AKILIRKAKP EPGEIAFLEL ELKLIADIGL VGFPNAGKSS LLHAMSRASP EIAPYPFTTL HPLIGCIEYQ DGYRIRAADI PGLIEGASEG RGCGHAFLRH IERTKALLYI VDAAGTDFRD PAEDLKILAK ELESYGDGSL LERRALVVAN KLDLLTEEQA FEILEAVGQA
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