| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_20082 |
|---|
| Symbol | |
|---|
| ID | 7200403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | + |
|---|
| Start bp | 792054 |
|---|
| End bp | 794546 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 716 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179716 |
|---|
| Protein GI | 219117858 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ACGAACGCGT CCTACCTAAT CGGAACCGGT ATTTACGATG TGACTGCGGC GTGTGCCGAA
ATTAATTTCA TGGGCTACGC TCGTGCAAAT CAGAACGGCC ACGGTATTCA TCAAAGGCTG
CGTGCACGGG CCTTTGTGAT GTCCGAACCG TACGGTGCTC CCTCCGCGGT ACACGATGCC
TCGAGGCCGC ACTCCCACGA AATCGTTGAA CGACTCGGGA GCCGGTCTCG GCCTGACCAC
TATCCTCGCC ATATCTCGAG GCAGGGCCGA GTCGAAGACC AGGCGAACAA AGAGGCTCTC
TCGGTCCTAG CGGATCCAGC CAGAACAGTA TGCTTTGTGA GCGTAGATAT TGGCATGGGC
TCGGATTTGC TCACACAGCG AGTTATAGCA CGGCTCGAAG AGCTATTGCC AATACAGGAT
GGCTTTGACA AGCGTCTTTG TCATCTCGAC AATCTGAGTA TAAGTGGTAC GCATACCCAC
TCGGCACCAG GGGGTTTCCT TCAGTATGCA CTGTATCAGA TAACTAGTCT AGGATTTTTC
GAAGAGGTAT TGGAAGTTTA TGTTGAAGGC GTTGCGCAGG CCATTCGACG TGCCTACGAC
AACTTGCAAG TGGGCTCAAT AGCGGTTGCT CAGGAGCGTC TACAAGGAGC CAGTATCAAC
CGGTCGCCAT CCAGCTATCT CCTGAATCCG GTTGAGGAGC GCGATCTGTA CGTCGAGGAT
GGAGACACCG ACAAACGTAT GCTGCAACTC AACTTTCTCA ACGCAAATGA AAAACCTATC
GGGGCACTTA ACTGGTTTGC GGTACATGGA ACTAGTATGA ATTCAAGCAA CCGACTAATT
ACTGGGGATA ATAAAGGCTA TGCTTCGTAC TTGATGGAGA AGCACTTCAA CGAAAACGGA
ACGTTACCGG GAAAGGGACA ATTTGTTGCC GCGTTTGCTT CGACAAACCT TGGCGATGTC
TCTCCGAACA CGGCTGGCCC GAGATGCATT GACACTGGCC TTCCATGTGA CTATTATACT
TCTACGTGTA ACGGCAGAAC CGAGCTTTGT ATTGCTTTTG GCCCTGGCAA GAACATGATT
GAATCGATGG AAATAATCGG ACGCAAGCAA TACGTTCTTG CTTCTGCGTT ACTTGGTACC
TCGAACGTTA AAAAGCTGAA GGGACGTGTT GCCTCTCGGC ATTCGTTTAT CAACATGGCC
AATCTGACCG TCAGAATGAA CAACACAACC TTTGCTCGGA CGTGCCCCGC TGCCTTGGGC
TATTCCTTCG CCGCGGGGAC GACTGACGGC CCGGGCGATT TCGACTTTAC CCAAGGAACC
AACACGTCGA ACTGCATATG GGACATCATC GGCGGGTTCC TATCCACGCC ATCCACCGAG
CAAATACAAT GTCACGCTCC AAAGCCAATC TTGTTGAACA CTGGGGAGGC GTCGCTTCCT
TACGCCTGGG ACCCCAATAT TGTACCGATT TCTGTCTTTC GGATAGGAAG CCTTTTCATT
CTCAATGTTC CAGGTGAACT TACTACCATG GCTGGTCGCC GGCTGCGTAA AGCCGTTTAC
GAAGTAGTCA GGTCAAATGG CGTTGCGGAT CCGATAATCG CCATTGCGGG GCTGGCCAAT
TCGTATACAC ATTATGTAAC GACCTTCGAA GAATACAGTG GCCAGAGATA CGAAGCAGCG
AGTACTCTAT ACGGACCGCA TACTTTAAAT GGCTACATAC AAGAATTTCG ACGCATAACA
TTGGATCTGC TAATAAATAG AGCGTCTGCT TCAACCAAGG CCCCAACCGA TCTCACTCGA
AAGCAAATTA CCGTCATACC TCCAGTTGAA CTGGATACAA TCGGTCTGGG TCGGAAGTTT
GGCTCAGTAG CTGTGGACAG CAAAGATCAG TACATTCGTG GAAATGACAC CGTGGTTGTG
TCTTTTCGAT CTGCCAATCC TCGAAATAAC CCACGGATCG AAGGTACTTT TCTTTCCATC
GATTACTTGG ACAATGATGG GAACTGGCAA ATGCAATATA ATGACGGAGA CTGGTGCACA
AGGTTTATCT GGAAAGGCGG TATAGTGCGA CTTGGATCAT CGTTTGCAGA AATACATTGG
AAAATACCAA GCGATACAAT GCGAGGCATT TATCGCGTTT GCCACTATGG CACGCGGAAA
AGCTTGCTAG GCTCTGCTGA GAGCGCTATA TACTATGCAC CTGAATGGAT CATTTCAAAT
CTCCTTGGCT CTATCACTGC CAACATGATT TTGCAGAGCG TGAAGCTAGC AATTGCAGTG
TCCGACCAAA TTCAGCGATT CACTGCAGGT AGTTTGGGCC ATTCACGGTA CAAGGAGTTC
TATGGTTGTA CCAGAGCTTT TCTTGTGCAC GATCACGCAA ACTAATAATG AACATAATTA
GTGAGGTATT CCACTGATCC TGTGAAGCCA TCTTCTCTCT AGCTACAAAA ATAGTAGAGA
ATACCAGAAA TAATTGAGAA TATATGTTAA CAT
|
|---|
| Protein sequence | MGYARANQNG HGIHQRLRAR AFVMSEPYAR TVCFVSVDIG MGSDLLTQRV IARLEELLPI
QDGFDKRLCH LDNLSISGTH THSAPGGFLQ YALYQITSLG FFEEVLEVYV EGVAQAIRRA
YDNLQVGSIA VAQERLQGAS INRSPSSYLL NPVEERDLYV EDGDTDKRML QLNFLNANEK
PIGALNWFAV HGTSMNSSNR LITGDNKGYA SYLMEKHFNE NGTLPGKGQF VAAFASTNLG
DVSPNTAGPR CIDTGLPCDY YTSTCNGRTE LCIAFGPGKN MIESMEIIGR KQYVLASALL
GTSNVKKLKG RVASRHSFIN MANLTVRMNN TTFARTCPAA LGYSFAAGTT DGPGDFDFTQ
GTNTSNCIWD IIGGFLSTPS TEQIQCHAPK PILLNTGEAS LPYAWDPNIV PISVFRIGSL
FILNVPGELT TMAGRRLRKA VYEVVRSNGV ADPIIAIAGL ANSYTHYVTT FEEYSGQRYE
AASTLYGPHT LNGYIQEFRR ITLDLLINRA SASTKAPTDL TRKQITVIPP VELDTIGLGR
KFGSVAVDSK DQYIRGNDTV VVSFRSANPR NNPRIEGTFL SIDYLDNDGN WQMQYNDGDW
CTRFIWKGGI VRLGSSFAEI HWKIPSDTMR GIYRVCHYGT RKSLLGSAES AIYYAPEWII
SNLLGSITAN MILQSVKLAI AVSDQIQRFT AGSLGHSRYK EFYGCTRAFL VHDHAN
|
|---|
| |