| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54375 |
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| Symbol | AP1mu |
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| ID | 7200276 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | + |
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| Start bp | 653168 |
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| End bp | 654688 |
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| Gene Length | 1521 bp |
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| Protein Length | 439 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179260 |
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| Protein GI | 219116931 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.907036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCTT CGGCCGTCTT CATTACGGAC TTGCAAGGCA AGAACATTAT CAGTCGAAAC
TACCGCGGCG ATGTACCAAT GCAGAAGGCT CTGGAACGTT TTCAAACGTA CTTGCTAGAA
ACCACCGACG AATCCAAGAA ACCGGTCTTT CATGTCGACA GCAATGGCGA TTGTTTAACG
GAAGATAATG TCGGTGCAAC AGGAGTTGGC GGGGAAGCGT ACATCTACAT TGCGGTATGT
ACAATGCCAC TCGACGTTCG ATCCAAACAA GTCTCCGGAA GACCAACTTT TTGTGACGAG
CTATCGTCCT GCGTCTTTCC AACTCTTCTG CTCACTACTT TGTTTTCGTT TTGATTGCCT
TTCCCAGCTG TCCAACCTGT ACTTGTGCGC CGTGACGACA CGAAATTCCA ACGTTGCTTT
GATTCTGACT TTTCTCTATC GACTATCCCA AGTCTTCAAG GACTACTTCG GCACTTTGGA
AGAAGAAAGC ATTCGAGACA ACTTTGTGAT CATATACGAG CTACTGGACG AAACCATGGA
TCACGGTTTA CCGCAAGCGT TGGACAGTAT GATTCTGCGT TCGTTCATCA CCCAGGGTGC
CAACCGGATG TCGGAAGACG CACGAAACAA GCCCCCGGTA GCTCTCACCA ACGCAGTTTC
CTGGCGCGCC GAAGGAATCA AACACAAAAA GAATGAAATC TTCTTGGATG TCGTGGAGAA
GCTAAACTTG CTGGTTTCGG CCAACGGTAC AGTCTTGCAT TCGGAGATCC TTGGCGCCGT
CAAGATGAGG TCCTTTCTTT CCGGCATGCC CGAGCTTAAA CTAGGTCTCA ACGATAAACT
CATGTTTGAA GCCACGGGCC GAGCGAATCA AGCGAAAGGA AAGGCCGTGG AACTCGAAGA
CATCAAGTTC CATCAATGCG TGCGCCTCGC CCGCTTTGAA AACGACCGCA CCATTTCCTT
CATCCCTCCC GACGGTGAGT TTGATCTCAT GACGTACCGC CTAAATACGC ACGTCAAACC
GTTGATTTGG GTCGAGGCTG TCGTCGAGCC GCACAAAGGA AGTCGTATCG AGTACATGAT
CAAGACGCGA TCCCAGTTTA AATCGCGATC CGTCGCCAAC AACGTGGAGA TCATCATTCC
CGTCCCTCCG GACGTCGATT CGCCTTCTTT CAAGTGTTCG GTCGGCAGCG TTTCGTACTT
GCCCGACAAA GATTCCGCTG TTTGGACAAT CAAACAGTTC CACGGCGGTC GTGAATATTT
GATGCGGGCG CATTTTGGTT TGCCAAGTAT TTCAGCATCA GATATTGACC CCGAAGCGAA
AAAGAAGGGA GATAACGCTT GGAAGGCGCC GATTCGGGTA CAGTTTGAAA TTCCATACTT
TACTGTTTCC GGCATTCAAG TCCGGTATTT GAAGATCATC GAACGAAGCG GCTACCAGGC
GTTACCATGG GTTCGTTACA TTACCGCCAA TGGTGACTAC CAGTTAAGAA TGGCATAACA
CTTCCAACAT TATCTTCTAT A
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| Protein sequence | MVASAVFITD LQGKNIISRN YRGDVPMQKA LERFQTYLLE TTDESKKPVF HVDSNGDSYI
YIALSNLYLC AVTTRNSNVA LILTFLYRLS QVFKDYFGTL EEESIRDNFV IIYELLDETM
DHGLPQALDS MILRSFITQG ANRMSEDARN KPPVALTNAV SWRAEGIKHK KNEIFLDVVE
KLNLLVSANG TVLHSEILGA VKMRSFLSGM PELKLGLNDK LMFEATGRAN QAKGKAVELE
DIKFHQCVRL ARFENDRTIS FIPPDGEFDL MTYRLNTHVK PLIWVEAVVE PHKGSRIEYM
IKTRSQFKSR SVANNVEIII PVPPDVDSPS FKCSVGSVSY LPDKDSAVWT IKQFHGGREY
LMRAHFGLPS ISASDIDPEA KKKGDNAWKA PIRVQFEIPY FTVSGIQVRY LKIIERSGYQ
ALPWVRYITA NGDYQLRMA
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