Gene PHATRDRAFT_45356 details

Gene Information

• Locus tag: PHATRDRAFT_45356
• ID: 7199986
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 934987
• End bp: 937190
• Gene Length: 2204 bp
• Protein Length: 479 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179322
• Protein GI: 219117055

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.486955
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AACAGTCCTG CTTTGTTGCT AATCCCTTTG TTGTCTTCCC TGCTCTGTCA TGTCTCTGAT 
TGAAGAGCAA GAAAAAGCCT TACAGGCCAA ACTAAGTTCT TTAGATGGTA TGTTCCCGTT 
TTCTTTCGAT GCCTACACAA CGCGTTGTAC TACATCTCAT TCTTTTGTAA TTTGCACTAT 
GACTACCAGG TCCCGATTGG GATAGCGAGG ATGATGACGG GCTTCAGAAA TCAGCAGAAG 
AAGATGCTGC GTTAGCGAAA ACGAAAAAGG GCAAAGCCGC CGGTAAACAC GGCAAGAAGG 
GTCGGAACAA GCCTGGAACA GTCTTGTACC TGGGTCATCT ACCTCCCAAC TTTGAGGAAC 
AAGAAATTTG GAAGTTCTTA CAGCAATTCG GCAAGGTCCT GCACGTACGT TTGGCGCGTT 
CGAAAAAGAC TGGCGGTGGG AAAGGATACG GGTTTGTGGA AATGCAACGT CCGGACGTGG 
CCAACATTGT GGCCGATACA CTCTCGGGAT ACATCTTGTT CGGCCAAAAA CGTTTGGTTT 
GCCACGTGAT TCCTCCCGAA AAAGTTCATC GTCGACTGTT CTTTGCGCAC GCACCAAGGG 
CCAAGAAGGA AGTTAGCCGG GTGTTGGCTT TGGAAAAAAT AAAGGATATT ACGACACGGC 
TCATTTCTCG GGAGCGCAAA AAGAGAGAAA CACTGAAGGA ATTGGGTATC GATTACGATT 
TTCCTGGCTA TGAGGCCTCG GCCAATCAAG TTACAAGCAA GGAGGCAGAA AAATTGGATG 
CAATGGCAGC AGAAAGGAAC AAGAATGCTC GCAAAGAGTC TGTTGAATCG ATCGGAAGTG 
AAGGGGCGAA AAGTACGAAA ACGAATCGCG TGGACTCGGT TGCTTGTGAG AATAGTGAAA 
GTGCCCAGCT CAAAAGGCGG AAGGAATTAA CGGATGATGT GGATCGTTCG GGATCCAAGT 
TCGCCAAGAA AACGCGCAAA GACTCGATTG CATCGGTTGA GAGCACGGGG TCGAAGACGA 
AAAAAGATAG AAGGAGAAAG CATTCGGATG GATCGGTGAA TGACGTAAAC GTCGACATCG 
TGTCACCACC CGATAAAAGT CCGAAGCGAT CAACACGCAA TAAACCAGCC AAGGCAGTGG 
CTGAAGCGGA CCCGAAAAAA CTCGTAGTAC AGTCGGAAAA GAAACCAAAG CAGAAATTAA 
ACAAGCGACG CCGATCAACG TAAATAGGCG ACTTCACACC TTTGGGCCAC CTTTTAAGAT 
TACTATTTTT CGCTTTCGAT CTACGAATGT GAGCGAGTAA CTCACATAAG AATGCACAGC 
AGCTCACATA TATTGGTTTA AATCATATCA ATGAGACGGG ATTTGTTGAA TGGATGAAGC 
AGAGATTTTG TGAGCTGCTT TCTGTTAGGT CATAATTTGT GAGGTGAGCG TCTGTCTACT 
AGAGTAGCGG CTGAGAATGG AGCCGCAAAG GTGATAGTTC GAAGTCAAAC AATACGGTAT 
TCGAAAGGTA GCCATGCGTC CAAATTCCGA AGGAGCGTTT CCTTGATCGT CTGGTCCGGA 
CGTAGGTAAT CTGTCCCATT CCGACACCGA TGTGACGCCG AAAGATACCA ATTCTCTTTG 
ATCAAGCGAG ATGGCAGAAA GCGAAGCCCA AAGCACGTTT TGACACTCAC CCTCTGGCAG 
AATCTGTTGA GGATAGAAAG GAACACTCGA CAAGTAATTT AGTGTAAGTC ATCACAATCA 
CCGTCAGCAC AGCACACGCT CTCTCTACTT AGAATAGATA TCAGGTAGCT CCAATGAAAG 
CTCTCTCTTG CATCGTGGTA ACCCTCTTTG TCATCGTTGT GGATGCCACG TCCGGTCACC 
CTTCTTCGGC CTTTGGACGG CGAGGCACTC GGGCCAGTAG TAGTAACAGT TCTGCCGAAT 
CTCATTGGTC GTCGACAGGA GTGCAGGGTT TGGGCCACGA TGAAAGCCGG TCGGAAAAAA 
TAAAGCAGGT CAAGAAGAAG ACTGACAAGG GCCTAGGCAA GGAGCAAAGA CACAACAATT 
CCTCCCAAAG GAACCTCATG CAAAAGGTTC CACAAGCAGG CAGCGTCTTC AGGATGGACC 
CGCTAGATCC CAACCTTGGC GTCAACTAGA GACACGCGCG TCGCAGGCGG ATCTTTTAAC 
ATACGATTCA ATATTTTATC AACTGAACAT TTCTCTCCGC CTAC 

 

Protein sequence

MSLIEEQEKA LQAKLSSLDG PDWDSEDDDG LQKSAEEDAA LAKTKKGKAA GKHGKKGRNK 
PGTVLYLGHL PPNFEEQEIW KFLQQFGKVL HVRLARSKKT GGGKGYGFVE MQRPDVANIV 
ADTLSGYILF GQKRLVCHVI PPEKVHRRLF FAHAPRAKKE VSRVLALEKI KDITTRLISR 
ERKKRETLKE LGIDYDFPGY EASANQVTSK EAEKLDAMAA ERNKNARKES VESIGSEGAK 
STKTNRVDSV ACENSESAQL KRRKELTDDV DRSGSKFAKK TRKDSIASVE STGSKTKKDR 
RRKHSDGSVN DVNVDIVSPP DKSPKRSTRN KPAKAVAEAD PKKLVVQSEK KPKQKLNKRR 
RSTYQVAPMK ALSCIVVTLF VIVVDATSGH PSSAFGRRGT RASSSNSSAE SHWSSTGVQG 
LGHDESRSEK IKQVKKKTDK GLGKEQRHNN SSQRNLMQKV PQAGSVFRMD PLDPNLGVN