| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45345 |
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| Symbol | |
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| ID | 7200034 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | - |
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| Start bp | 909410 |
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| End bp | 911320 |
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| Gene Length | 1911 bp |
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| Protein Length | 575 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179534 |
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| Protein GI | 219117479 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.824285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCTTTTGTTC CACACACTCC AGTCCATCGT TGAAGGCCCC CACTTGTTGG TTTGGTACCT
TCGCTCTATA CCCTTTTCAG TTCTGTGCTA TTGTTCACCA TTGCCTCGGT TTTGCAGACT
CTTGGTTACG AGGCGAGGCG AGTTTACGAA CGCGGTGCAT CATGAAGGAT AGTAGATGTA
CGAGGCTGGG CGCGCCGTTA CTCGTACTCT CGTTGTCGTC CTGGTCCGGG GTGGTGAAAG
CCTGGACGAA TCATTTCGTC CACAATCCCC AACGTCACTC CTCGGCACGG AATCCTGGCG
TAGCCTGGCG TGGAAGACCT TCGTATCGCG TCGGACCGTT GCGGGAACTC GTAGTGACGG
ACCAATCGTT CCGACCGACA CGGGGAGTAC CACTCCACGC CACGGGGAGC CGTGATGGCC
GTGCCACCCA AGCCGACATT GAATGGGACG AAGACGAATA CGATTTCGAT CAGCAAAAGA
GTATGGACGA GTATCGGACC CAGTTTCAAG CACTCGCCGC CGAAACGTCC CAAAATCCCC
ACGCCGTACA GCAAGCCCAG GATCTCTTTG ACGAGCTCTA CAAGGCGTAC ATCATGACGG
AAGACGCCTC CTACTGGCCC GGGACCGATA TTTACAATCT TCTGCTCGAA ACACACGCGT
ATTCTCCGCA CAAGAATGGT GCAGTGGAGG CAGAAGCCAT TGTTGCCCGT ATGGAACAAC
AGGAACACGG GGTGGCCAGG CCCAACGTCG CAACCTACGC CAAACTTATG GAGGCGTGGA
CGCAACGCAA ACGCTTGGAT AAGGTCACGG CCGTATGGGA ACGCATAGCC GAACAGGGAT
TGCAACCCAA CATTTCTACT TACAACAAAC TCATCAAAGC CTACGGGGTT GCGGGCAAGG
CGGAACAGGC TTTGCAGGTA CTGGAAGATT TGTTGCTGCA ACACCAAGGG AAAGACAACA
ACAAAGAAGA GGACGACCAG ACGGATGCGG AGACCAGCAC AAAACCCACG CAGAAAACCT
GGGTACAAGT GTTACGGGCC TTTGCCAGCA AAAAATACGT CCGGAATGGA GAGGGCGTGG
ACCAAATACA AGCCTTGCTG CGCCGCATGG CACAGGCCTA CCGACAGGGC GAAGCAGACT
GGAAACCAGG TGTGGATGCC TACAACTCCT TGCTCAAAGC CATGAGCTTT CAAAAGGGAT
CCGGTAAAGA GTCGGAAAGC GTTCTGTACG GCATGCTGGA ACAGTTCCGG GAAGGAGAAG
AAGCGTTGCG GCCGAACGCG GGTAGTTTTT ATCACGTGTT GCACGCGTAC CGGGGTGACA
AGGATGCGGG TGTTTCCTTC AAGGTGGAAA AGTTGATACA GTTACAGGAA GCTTTGGCAG
TCGAGCGCAA CGACCCAAAC GATCCAGCTC GAACGACAAC TCGCGTCTAC AACGCCGCCA
TGGCGGCTCT ATCGCGGACC AAAGATCCGC AAAAGGCCGT CCGCGCCAAG AGGTTTATGG
ACCGTATGAA TCTGCAGCAT AACGATCCAG ACATGCGTCC GAATGAAGCC ACATACACGA
GTTTGCTGAA CGCGTGTGCG TACACAACCG AAGGTGAACC AGCCGACAAG CTGGCCGCGT
TTCAAATTTC CGTGGACGCG TTGAAAGAAA TCCGCCAATC CCCATCCATT TCGACAAATT
CAAAAATGTT TGGGTTGTTT TTGAGAGGAT GCGCCAATCT CATGCCGCAT AGTCGAAAAC
GCGATGCGGT GGTAGAAAGT GTATTCGCAT CTTGCTGTGA CGAGGGCTAC ATTTCAGACT
ACGTCCTTGA ACAGTTTGAA AGGGCGGCCT CGGAACAATT GCAGCTCAAA GTGTTGGGCG
GCTTTCTTGT AGATGGCGTC GAAACTCCAG CCGCATGGAG ACAAAATGTA G
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| Protein sequence | MKDSRCTRLG APLLVLSLSS WSGVVKAWTN HFVHNPQRHS SARNPGVAWR GRPSYRVGPL
RELVVTDQSF RPTRGVPLHA TGSRDGRATQ ADIEWDEDEY DFDQQKSMDE YRTQFQALAA
ETSQNPHAVQ QAQDLFDELY KAYIMTEDAS YWPGTDIYNL LLETHAYSPH KNGAVEAEAI
VARMEQQEHG VARPNVATYA KLMEAWTQRK RLDKVTAVWE RIAEQGLQPN ISTYNKLIKA
YGVAGKAEQA LQVLEDLLLQ HQGKDNNKEE DDQTDAETST KPTQKTWVQV LRAFASKKYV
RNGEGVDQIQ ALLRRMAQAY RQGEADWKPG VDAYNSLLKA MSFQKGSGKE SESVLYGMLE
QFREGEEALR PNAGSFYHVL HAYRGDKDAG VSFKVEKLIQ LQEALAVERN DPNDPARTTT
RVYNAAMAAL SRTKDPQKAV RAKRFMDRMN LQHNDPDMRP NEATYTSLLN ACAYTTEGEP
ADKLAAFQIS VDALKEIRQS PSISTNSKMF GLFLRGCANL MPHSRKRDAV VESVFASCCD
EGYISDYVLE QFERAASEQL QLKMASKLQP HGDKM
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