Gene PHATRDRAFT_45308 details

Gene Information

• Locus tag: PHATRDRAFT_45308
• ID: 7200013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: -
• Start bp: 796615
• End bp: 798744
• Gene Length: 2130 bp
• Protein Length: 709 aa
• GC content: 51%
• Product: ribokinase
• Protein accession: XP_002179509
• Protein GI: 219117429

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.394155
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGTGT TACGGACAGA AGCTTTGTTG GCTTTATTTT CGACTCTTCT TCTCACCTCG 
GTTTGCGTCG ATGCATCCGG GAGTAGGCCT CATCGGATTG TTGTTATTGG TTCCATCAAC 
GCTGATACCT TCCTTCCCGT CGATCGAATA CCAATTGAAG GTGAAAATTT GACGCTTTTA 
CCGGGAAAGC TCCCGGTCGT AGACGTCCCC GGTGGCAAAG GCTGTACGCA GGCCGTTGCG 
GCTTCTAAGT TGCTAGCACC GGTGGGAGGA AGTGTTTCTT TCGTCGGACA ATTTGGCAAC 
GACGTGGCTG CCCAAATTCT GCAACAATCA CTCGTTGACG CTCATGTCGA CGTCACATTT 
TGTTCGCATC ATGAAAATAT ACCCAGCGGT CGAGGCTACG TGTTTCACAC GACATCGGGT 
CAAGTTAGTG CCGTTGTCTC GGGTGGGAGT AACGAGCTGG GATGGCTTGA ATGGGAGCAC 
GCTTGGGAAA TATACAATAA AGATAGAAAC CAGATTCTGC TTCAGGGAAA AATCGACAAG 
CTCTTGCAAG ACTGTCGTTT AGTCATGCTT CAGTGCGAAG TTCCGGAATA CGTCAATCGA 
TTAGTTGCTC GGTGTGCGGC GCAGCGTGGG AATATTCTCG TGGTGCAAGA TGTTGGCGGT 
GAAGACCGGG GAATGAACGA AGAGCACCTC CGGCACTGCG ACTATCTCAT GCCGAATGAA 
AGCGAATTGC GGCGTCTAGT GCGATCGTTT GGTGGCCCCG AGAACGACTC TGACATTGAA 
ACGATGGCGA AATTTCTCCA GGCCCGGGGT GCTCGGAATA TTTTGGTGAC GCAAGGAAGC 
AAAGGATCTA CTCTAGTAGC AGACGATGGT ACTGTAATTC ACCAGCCCGC CATTACAATA 
GAAGAGGTGC TTGATGAAAC GGGCGCCGGC GACTGCTACC GTGCAGCCTT TTGTACAGCC 
TTGTGCGAAG ACAAATCTCT ACAGCAATGT ATGGAGTGGG CAACGGCTGC CGGGGCCTGT 
TCGGTAGAAC GCTTAGGAGC TGTACCCAGT ACACCAACTC GCGGCCAAGT AGAGGATCGC 
GTCCATACGA ACTGGGTGGA GCGAAGCGTT CTTGATATTC CAAGGGGAGA TGGTCTTGGC 
TTTCGAGGAG GGGCCAAGTC CTTTCCATTT TTGATTGGAT CCCGACTCAA CTCCATGAAG 
GATCGACCGG AATTGTGGGA CGGTGCTTTG GATGATCCTC GAGAGTATGT CAGACGCCAG 
TCAACAATCA AAGGACTTAC TTGTGTGGAC TTCAACTTTC CACAGCACTT TCACACGTGG 
TCGAACGAAG AAGCGGCGAA GTCCCTCGAG ATGGCTGGAT TGCGAGCTGG AGCAGTATGT 
CTTCGGTATC CGAGCAAGTT TGCCCGAGGA GCCATGAACA ATCCAGATTA TGAACTGAGG 
CAAGAAGCTA TTGAGCTTAC CAAGCACGCC GCACAAATGG CGAGGGATCT TGGCGCAAAA 
GAAGTGGTTA TATGGAGTGC TTACGATGGA TACGACTATC CCTTTCAAGT CGATTACGAT 
GAAAAATGGG ACGAGCTAGT GGGCGCCTTT CGAGAGTGTT GTGATGCCTA CCCCGATATT 
CGGTTTTCTG TGGAGTACAA ACCTACGGAT GAGAACACCA GGTTTTTCAC GATACCGAGC 
ACGGGAGCGG CTTTGCTAAT GGTGAACGAA GTAGACCGCC AAAACTTTGG CCTTACCCTG 
GACGTCGGGC ACATGCTGAT GTCTGGTGAA AATCCTGGAC AGTCAATTGC CATGGTGGGA 
CGTGCAGGAA AACTGTTTGG CGTGCAGCTC AACGACGGCT TTACCCGCTT GGCTGCGGAG 
GACGGTCTTA TGTTTGGATC CGTGCACCCC AGCATGGCGT TAGAGATCAT GTACCAGCTG 
CGGCGAACGA AATTTGATGG ACACTTTTAT TTTGACACTT TTCCCCAGAG ATCAGATCCT 
GTACGCGAGG CAGAGTACAA TATTCGAAGG GTGAAAGCAT TCTGGTATGC TGCCTCTTCC 
ATGGATGCAG ACCGACTGAA ACGCGTTATG GACGAACATG ATGCAATTGG AGCCTTAGAA 
CTTGTAGATG ACTCATTGAG AAGAATATAA 

 

Protein sequence

MLVLRTEALL ALFSTLLLTS VCVDASGSRP HRIVVIGSIN ADTFLPVDRI PIEGENLTLL 
PGKLPVVDVP GGKGCTQAVA ASKLLAPVGG SVSFVGQFGN DVAAQILQQS LVDAHVDVTF 
CSHHENIPSG RGYVFHTTSG QVSAVVSGGS NELGWLEWEH AWEIYNKDRN QILLQGKIDK 
LLQDCRLVML QCEVPEYVNR LVARCAAQRG NILVVQDVGG EDRGMNEEHL RHCDYLMPNE 
SELRRLVRSF GGPENDSDIE TMAKFLQARG ARNILVTQGS KGSTLVADDG TVIHQPAITI 
EEVLDETGAG DCYRAAFCTA LCEDKSLQQC MEWATAAGAC SVERLGAVPS TPTRGQVEDR 
VHTNWVERSV LDIPRGDGLG FRGGAKSFPF LIGSRLNSMK DRPELWDGAL DDPREYVRRQ 
STIKGLTCVD FNFPQHFHTW SNEEAAKSLE MAGLRAGAVC LRYPSKFARG AMNNPDYELR 
QEAIELTKHA AQMARDLGAK EVVIWSAYDG YDYPFQVDYD EKWDELVGAF RECCDAYPDI 
RFSVEYKPTD ENTRFFTIPS TGAALLMVNE VDRQNFGLTL DVGHMLMSGE NPGQSIAMVG 
RAGKLFGVQL NDGFTRLAAE DGLMFGSVHP SMALEIMYQL RRTKFDGHFY FDTFPQRSDP 
VREAEYNIRR VKAFWYAASS MDADRLKRVM DEHDAIGALE LVDDSLRRI