Gene PHATRDRAFT_45239 details

Gene Information

• Locus tag: PHATRDRAFT_45239
• ID: 7200113
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: -
• Start bp: 575289
• End bp: 578958
• Gene Length: 3670 bp
• Protein Length: 1097 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002179460
• Protein GI: 219117331

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.536296
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGCATTCTA TCCGCAACCA TACCTGTTCG ACAAGTCAAT TGCTCTTGTT GCGTTGACAA 
CTGCAATTGA CCCAGAGCTG TGCATCAACC TTGAAAGCAA ACTGTAAAAT CACCCAGCTT 
TGTCGTTATG CTCCGATCGT CACGCATCAT ATCGGCATTT GGCCGTCAAC ATTTTATGCA 
CGCATCAATC GCTCCGTTGC GGTCGATGTC ACCGTTGACT CTGGTGGTCG CCCGGGCCAT 
CTCCACTGGA ATGCAAACAC GCAATTTCAG CAAGAAGACT TCACGGGATG AAAGTATTAT 
TCCGGGAGTC CGTTCCGAAT ACGGATCCCT CGGAGATCTA CCGTCTCCCT CCAAAGCTGC 
CGCGCCTTGG CAAGCCGAAC ACAACATCGA CGTTCAACGT GTCACTCAAA AAGCTATGGT 
ATATGAGCTG TGCCAGTCGC AAACTCGAAC AATCGAAGAA GTGGTTCCGT GGTTTTTGGA 
GAACATGCCG ACTTCGTATT TTCGGCAAGT TCCCGAACGC TTTCGGATGG ATCACATCAA 
AGCAATTGCG GCCGTCAAAG ATGCGAATAT GGACTTGTAC TTGAACTTGC AGTCGCATTT 
ACCGGATGGT CGTCAGGTCT TGACTTTTAT TCGCCCCGGC ACACAATCGG GTACTCTTGT 
CAAAATGGTG CAGGAGCTCC CCTGGCGACA GAGCGCGGCC GACTATGTTC CGCTCTCACG 
CATTCATGTG TTTTCCACAA GGGACGACGC TATGAGTCTC AACATGTTTG TCTACGGTAC 
AAAGCCTCCG GGATCGTTGG TCCATGAGAC GGGCGCATCA ATCATTGACT ATGCTGAGCA 
AGTCAACGAT GGCAGTATTG TCGATGATAG GGGCGAGTTG AAGCCATCAC CAGTCTTTGA 
ACGCGGAGCC ATGATTGAAT ACCTGCAAAA CTGCAGTGAG AACTACATCA ATATTGGTGT 
AAATGATCCC CGGCGCTTCC TCAATCAGAG ATTGTTATTT GCGCAAGTTT CTGGATCGGA 
AGGTACAGCG GTCCAGATTG ATCCCGTCGA TACGGAGAAC GGAGGGCACT ACTGGGTTGA 
CATGGCGGTG GCCAATTCAT TACCGCAAGT AGCCTTGGAA CACTTGTCAC GATTGCTGTA 
TGTCCACGAT TTTGACGTGA CACGAGCGAG GCTCGATGTG ATTCCTGATG GCAAGAACGG 
AAATATTACC ATGTTGCGAA TGCTAGTTTC GCCATGCAAT AAATCGCCAG TACTACCAGA 
AACGTTGGAT CTCCTTGCCT TGGAACTCAA GCGCGTCAAG TGGTTGGATC CGGCTACTAT 
AACTCTGGTC TTTGAGAAAT ATCCACACAT GAGTGTCGCC ATCGGCGAAA CTATTACAGC 
GCTTTGCTCG TTGATGCATC CCATCATGAC CAAGTACAAT GCAGTCGCCT ACAGCAAGGC 
CAATATTTAC GAAACCTTGA CTAGCGAGCG TTTCATTCCG CACGCCGAAG CGATTGCAGA 
TATGTTTCTT GATCGCTTCA ACCCCCATAA TCCTCTATCG AACGCAGACT TTGACAACCG 
CTGCGACACA ATTCTGAAAG CGGTTGATAC CGATGTGGAA GACACAGTCG CCACGGAATT 
GCTGGAAAAA ATGATCGACG TTGTGAAGCA CACGCTGCGC ACAAATGTTT ACCTGTCCGA 
CCGTTATGCG CTGGCCCTGC GATTAGATCC CCGCATCATG GTACCGCCAG GTGGCGAAAA 
TAAGGAGCTT CCCTATGGTG TCTTTTTTAC GCATGGTCGT CGCTTCAACG GGTTCCATGT 
TCGCTTCCGC GATATTTCTC GCGGCGGCAT GCGTTTGGTG ACTCCTCGTA GCCCAGAGCA 
GTTTGCCTTG GAATCGGCTC GCCACTACGA TGAATGTTAC GGCCTAGCCT TGTACGTTTC 
GCGATATCGA AGTGTTTCGG CTTATAGATC GTTTTCGATT CCTATCACTC ATGCTTTCTC 
TCATTCCATT GCATAGTGCT CAACAGCTCA AGAACAAAGA CATTCCCGAA GGTGGGTCCA 
AGGCTGTATG CTTGATCAAC ACTAACGGAA TGTCAGATTC CGGGAAAAAC TTTGTCATGC 
GGAAAAGTGT AAAGGCTTTT ACCGACTCGA TTCTTGATCT CATTGTGGAG ACGGATGAAA 
CGAGAAAGAA CATTGTGGAC TTGTTTGGTA AAAAGGAAGT GCTCTATCTC GGGCCAGACG 
AGCAAGTAAT TCCGGACGAC ATTAACTGGG TTATTAAACG AGCTGGCATG AGAGGATATC 
AGACGCCGGC AGCTTTCATG AGTAGCAAAC CTCGCGCGGG GATCAATCAC AAGGTATATG 
GAGTAACAAG CGAAGGCGTC AACGTTTATC TAGATGTTGC TTTGCGTCAC ACGCTTGGAA 
TCAACCCGAA AGATGCCCCA TTCACGGTGA AGATTACGGG TGGACCCGAT GGCGATGTCG 
CCGGCAACGA AATGAAAATC ATGATGCGCG AATACGGAGA CAATGCCAGG ATTGTCGGGA 
TTGCGGACGC CTTTGGCTGC GCGGAGGATC CCAGGGGCTT AGACCATGGC GAGCTAGAGC 
GGCTCGTTAC TGGAACCATG AGTATTGTCC ACTTTGATGC TTCGAAGTTG AGTGCTGACG 
GAGTTCTCCA TACCTGCGAC ACAGAAGCTG GTACGAAAGC GCGAAACACC ATGCACAATC 
GCCTCGTGAC GGATGCATTT GTCCCTTGCG GAGGCCGGCC TGGTACAATT GACAGCACCA 
ACTACAAGCA GTTCCTCCAG ACTGATGGCT CACCCTCGAG CAAGCTTATT GTTGAAGGTG 
CCAATCTATT TATTACTACT GAAGCACGTC AAGCTCTTTT TGACGAGGCA GGTGTAGTGA 
TCGTGAAGGA CTCATCGGCA AATAAAGGTG GTGTCATAAC GTCTTCCTAC GAAATCTGCG 
CTGCAATGCT CTGCACGGAA GAGGAATTCT TCGACAATAA GACTCAGATT GTGAGCGAAG 
TCCTGGATAA ATTGCGTAAG AAAAATTTGG ATCATGGGCC ACAGTCGGAT CCGACGCTGC 
CAGTTTTCTC ATGTTGCTAT TCTTCTTTAC GGTTAATAGG GGGTCTTGCT AAGCTCGAAG 
CCGAGCTTTT ATTCCGAGAA TTCGAGAACT TCGGTGGTTC TCTACCAGAA GTGAGTCAAA 
TTATAAGCAA TTCAATCAAT GCCGCGACAG ATGCTCTGTC GGTAGCTTTA GACACATTGT 
CGGAAGAGGA GCGCGAGTCT CTCCTGCCCC TGTTCCGTGC TCATCTTCCC AAGACGTTGG 
CCGACCTTTC CTTTGAGCAC GTCCACGATC GTGTCCCTGA GCAATACATC AAGAATGCAA 
TTAGTTCTTG CCTTGCATCA AAGATTGTTT ACAAGGAAGG AACCAGGTTC ATCTCCTCGC 
AAAAGCCCGA CAAGCTTGCG GCTATAGCTC TCAAGTATAT TCACAAGGAA AAGGAGGTGG 
CTGATTTGAT GGAATCTCTA TCGAGCAGTG AGTTTCCGGA GAATGAAAAG AAGAAAATTC 
TGTATTTATT AGAGCGCGGA GGCGCGCGCA CAGCGCTTGA AGCCCTTTAG ACAGTAGTGA 
CTGGTCCATG TATTCGAACA GTGCCAAAAG AAGATCTTAA ACACTTCTAG GTTTGTAGAT 
GTATGGTAAC 

 

Protein sequence

MLRSSRIISA FGRQHFMHAS IAPLRSMSPL TLVVARAIST GMQTRNFSKK TSRDESIIPG 
VRSEYGSLGD LPSPSKAAAP WQAEHNIDVQ RVTQKAMVYE LCQSQTRTIE EVVPWFLENM 
PTSYFRQVPE RFRMDHIKAI AAVKDANMDL YLNLQSHLPD GRQVLTFIRP GTQSGTLVKM 
VQELPWRQSA ADYVPLSRIH VFSTRDDAMS LNMFVYGTKP PGSLVHETGA SIIDYAEQVN 
DGSIVDDRGE LKPSPVFERG AMIEYLQNCS ENYINIGVND PRRFLNQRLL FAQVSGSEGT 
AVQIDPVDTE NGGHYWVDMA VANSLPQVAL EHLSRLLYVH DFDVTRARLD VIPDGKNGNI 
TMLRMLVSPC NKSPVLPETL DLLALELKRV KWLDPATITL VFEKYPHMSV AIGETITALC 
SLMHPIMTKY NAVAYSKANI YETLTSERFI PHAEAIADMF LDRFNPHNPL SNADFDNRCD 
TILKAVDTDV EDTVATELLE KMIDVVKHTL RTNVYLSDRY ALALRLDPRI MVPPGGENKE 
LPYGVFFTHG RRFNGFHVRF RDISRGGMRL VTPRSPEQFA LESARHYDEC YGLAFAQQLK 
NKDIPEGGSK AVCLINTNGM SDSGKNFVMR KSVKAFTDSI LDLIVETDET RKNIVDLFGK 
KEVLYLGPDE QVIPDDINWV IKRAGMRGYQ TPAAFMSSKP RAGINHKVYG VTSEGVNVYL 
DVALRHTLGI NPKDAPFTVK ITGGPDGDVA GNEMKIMMRE YGDNARIVGI ADAFGCAEDP 
RGLDHGELER LVTGTMSIVH FDASKLSADG VLHTCDTEAG TKARNTMHNR LVTDAFVPCG 
GRPGTIDSTN YKQFLQTDGS PSSKLIVEGA NLFITTEARQ ALFDEAGVVI VKDSSANKGG 
VITSSYEICA AMLCTEEEFF DNKTQIVSEV LDKLRGLAKL EAELLFREFE NFGGSLPEVS 
QIISNSINAA TDALSVALDT LSEEERESLL PLFRAHLPKT LADLSFEHVH DRVPEQYIKN 
AISSCLASKI VYKEGTRFIS SQKPDKLAAI ALKYIHKEKE VADLMESLSS SEFPENEKKK 
ILYLLERGGA RTALEAL