Gene PHATRDRAFT_45222 details

Gene Information

• Locus tag: PHATRDRAFT_45222
• ID: 7200246
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: -
• Start bp: 526914
• End bp: 532197
• Gene Length: 5284 bp
• Protein Length: 1276 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002179451
• Protein GI: 219117313

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0393283
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGGCT ACCGTGCCCA TCTATGCGAG GTCCGTGACC GTAAAACCTA AACATCAGTC 
ACCATCGGAA TTGACTTTCC TTGTTTCTCG CGCTGTGGAC GAAACGAGCC GTTGGCAGGT 
GAACCAGAAA GGACCCGTCA CAGGTGTGCC ATTCAAAATC AACAAATTTG TAACAGAGAG 
ACGGTTTGGC GAGTCCCAAG GGTTTCCAGA GCTTGTCGAA GTCAAGAAAA AAGGTAACAG 
TGCTTTCAAC GATCTAAAAC GCAGGCCAAG GATCTGCTTT TACTCATTTT CTCATCTATT 
CGCTCACTCG CTCTGTATTG GGTGTGCTAG CAGGTTAATT GACAGTGACA ATGGAGGCAC 
AAGGCCAACA GGAAAAAGCG GTGCTTTCAG GTACCGCAAA AGCCAAGGAA GAACAAGAGT 
CGGACGAGAA TCCCCCTTCG GCCGACAACA CGTGGAATGC GTCCAACACC CAGGAGCAAA 
ATCGCAGACC AAGCGTGTTT GACGTCTTCG ACGGCTTGCA AGCTAATCGC CCTTCTGCTG 
ATTTGTCATA TTCTCCGTCT TCTCTAGAAT CGGAATCACG GGCGAAAAGG CAAACAGTAG 
AAACTGTGAA CGATCCTAGC GTGCGGAACG GAGTTGTCCT GCAACAGGAG AAGACGCCGC 
CTCGTGTGCC AAACCCGGTG CACAACCGCA ATGTCTCGTG GGGGCAAAAC GACATTTTCA 
CAGATGGTCT TCCGCCTTTA CCCAGACTTC GCAAGCCGTC GCAAGATTTT TACGGTTTCC 
AAAATCTACA GCAGCCGGAT CTCAATTCGA ACTTACAGTC AAACGAGTTT TCGATTGCCA 
ACATTGACAT TCGAAGGAGG CTGAATAGTG TCGGAAATAA ATTAGATTTA GAGGACGTGA 
CGCAACGAAA TCCTTTAGAA TCAGAGGCTG AAACCTACAT CTTGAAAGTG CTAGAGTCAC 
GGGATCCAAC AACAAGTCGA CCGAGATCCG ACTCTGAGGC CAATACCACT GTTCTTTCGG 
AGGTACCCGA CGAAGCTTTG CAAGCCCTTG TCGACGATGC GGAAGTGGAC GCTCCGTCTC 
AAGAGGACCC TTCGGCTTTA TCGCCACGAG CTTCACTTGA AAGTAGCGGT GCAACGAAGT 
CTACGAAAGT ACTGGCCACA GCTAAGCTGA ATCGGCATCG ACGCACTGAA ACAATGGAAC 
AAAAGTTGTT TGGGCTAACG ACAGCCATTG GAGCTATCAA TTCGTTACAC AACGACGCAT 
ATCATTTTGT TGGAAACACT CCGATATCCC CGACGGTGTA CAAAGAATCA ACAGACCCAT 
TGCTCTCATC GGTCACAGAA GAACCCACTT CATCCGGCGA CATGTTTGGA AAAAACGCTA 
GTATACTCTA CAGGCGTGCG AATGCTCCGA AAAAAGAAGA CAATGCTGTT CAATCCATTG 
GAGATGCCAA TATTGCCAAC GAAGACTCCA GTCTCGGTAC GGCAACGTCT CGTTGGCGCC 
TGTTAAAGCA GGCCATACAC GGTGACACTA TTGCCAATCC GAAAAAGACC GATGAAGAGG 
GCGTTGGCGA AGAAGCAGAC GAGGAAGTCG GGATACAGTC AGATGGAGAG ACTGGCGAAG 
AGAACAAAAA GTTAGATGAT CGGGGTAGCA ACCCGACTGG CGTAGCTGCC GATGGTGAAG 
AGGAGGATAC GGAAGAGGAG GCACACGTGG CGAATGCCAT TAGACGTGAT TGGGAGATTT 
TTAAAGAATT TCAAGATTTC TTTAGTCCCC GTCGGAATTC AATCAAACAG TACCTTCGCT 
CTCTCATCCT TTATTTCTTG CTGCCTACAA TCTCTGTGGC TGCCATTTTA TTTCATCTTG 
CTGGGAACCC TCCCACTGGT ATCGTCTCTA GCGACTTACC TTTTTTGAAT GGCACACTCG 
CCAGTAGAGA TGGGGAATCT ATCAATCCGG ACAAAGCATC AGCGTCCTGG TGGCTTCTCT 
TTGTGTGCCG ACAGGCCATT ACTTTTTCGT TAGCTAAAGG AATGGAGCTT TTCATAGTTG 
ACTTTCTTTC TGTCCGCACG AAGGCTACAA TTCGCTTACT TGGGCCCTGG GCTACCTTGT 
TTATCTTGCA ATCGCGTGGG TGGCCATTCG TCCTCTTTAT GTGGGGAGTG TTTAACTTCT 
CCATGCTGTC AGGGGCGAGG CCGTTTTTTT CTCACTGGCT TTATTGGCAA GACCTGTTTG 
ACTTATTTAA CGAGTCAAAT CCAGGCGGGA ACGTCGTCGA TTCCGAGTGG AATCATCGGT 
TGTTGGCAAT TGCAGTCTCG GTGTCCGCTG TTGTTTCGGT AAAACGGTTT TGGCTTGGCT 
TATACCTCGG GCGACAAACT TTCAGTAAGT GTGTTTGTCC TATTTCTCTA GTACTGCTGA 
ATGCGCACAT CTCTCACCTT CAATTGTCTG TAGCGCGGTA CTCTGACAAG CTTGCTTCTG 
TGATGAAGAA AATTCTCCTT GTGAGCGAGG TTGCATCTCT GGTAAATTAT TCTGTTCATT 
CCATGATGAC TATACGTGCC GATAGCTTAT TCACTTTTGC TGTGGTTGTT TAGGGACGTG 
ATTTTGAAAA GTATGTTTTG GGGCATACGA AGGGGAGTAC TCGGGCACCG CCCTCAGCGA 
GCATGTTCGG CATAAGTGGC GACAAACTTA CGGGCTTTTT GAACAGCATG AACGATGACT 
CAAGTAGCAT CGGAAGCAAT AGCCGATTCC GTTCTGAACG ATCGTATGGA ACCGATCTCA 
ATGATCCGGA CCTTGTCATC GATCCCGAGG ACCGACATCC CTTGACCGGA AGTCTCTCGG 
CAGGCCAGAA GACAAAAATA ATACAGCTCC TCGGAGCTTG GGAAGAACCA ACAATTGCCG 
AACAATCAGC TGGTAGAGTT TCTGTGAATG CTCTCCTCCA GTTTCGTCGA GCCCTTGCAT 
GTCTACGAAC GCACTACCCA TTCTCCGGCT CCTTTGGGTT GGCTGATACC CGGGAACTGT 
GCATAGAGTC GGCTCAAGAA GTATACACCC GACTTTTGCT GCGGACCCCG GACAACAGTA 
CGCTCACCTT TGAAATATTA GCATTGCTAA GTGTGCAGAG AGACGGAACA CTCGATCACC 
ACAAAATCAA AGACTTGATT CGACTGTTTC GTCCAGACCG CGATGGTACA TTGAAGGTTC 
TCGATTTTGT CAAAAGTGTC GACTCCGTCT ACAAAGAACT GCGCCTCCTA CGAGCTTCGG 
TTGCCAATTC TTCGTAAGTT CATCTGTGTA GAAGGGACTT GAGGGTTGTA TGTCTAAGCC 
AGCCTTATTC TTTCACGGCA GGAAGATCGA CCAGGCTTTT GAAAACATTT TCAACATCGT 
AAGTTATAGT GAGCATACTT CACTTTCCTC ATCGCAAATG CTCAACACTA ACACTCTGTG 
TGTCCTTCAA TTGAAAGGTA TTTTACGCCA TTGTTATCAC TGTGTTGTTA AGTCAACTTG 
GATTTGATCC ATTGGCATTG TTTCTTAGCA TCAGTGGTGT AGTTCTCGGT TTTGCATTTA 
TGATTTCAAC GGCGTCTTCT AAGTATTTTG AAGTACGCTT TGCTGACTGT CTGCCTTTCA 
TCATTTGAAA GGAGGGAAAA GCTCACATTA TATGCCTCCT GCTTTTAACA GGGACTGCTT 
TTTATCTTGG TTCGAAGACC ATATGAGTGA GTGAAAAGTT ACAGCGAAAT AGATGAAAAA 
TTATATTGTT TGTTCCTGAC ATTCGAGAGC CGCACTTGGT TATCTAGAAT CGGTGACGGC 
ATACACGTCA GCAATATCGA GACAGACACA AGCTTTACGG GTTCAGCTTG GTGGACGGTC 
GAAGATGTGA CTCTGTTTAC AACGAGTGTC GTTTTCATGT TCACGGGCGA AAGGGCAACG 
CTGAGTAATG GCTCTTTAGC CAATAGTCGA GTCATCAACT CGAGTCGATC GCCAGAGGCG 
TATCTTTACA TACTCCTGAA GTTTCCGATG GGGGTTTCTT ACGACCATCT CCAAATCTTC 
AACAAAGCTT TGGAGCAATT CTTCCGGAAT CGACCTAGAG AATGGTTGTC CTATGTTAGT 
TTCCGAGCGA CAAGAGTGTA AGTCTTCCGT TTTTTCTGCG TTTTATGTTT TCCAACTTTT 
TGGAGTACCA CTGACTGTGA TCTACGATTT CACAGCGAGG CCGATGCGAA TTTCGTAGAG 
TATATTGTTG TAGGGCAACA TCGCGCAAGT TGGGCGGATT GGACAGCATG TGAGTAGATT 
CCTCTTTTGG TCTCCGATTC TTTCGAAAAC TCATTAGCGT TCTTTTTTGC TTCTCTGTCA 
GTGATGCTGA GTAAAGCTGA CTTGATGCAC TTTTCGCTAG AGTTATCAAA GAAACTAAAT 
ATCTGGTATC GAAGCCCACC ATTGCCTGTC GATTTGTCAG TTGTTTCACA AGGTGGAGGA 
TTGAACCTAC CGGGATCCTC GCCCTCCGGC CCACTGCCAT CCGTTCCCAA CATATCAGCT 
CCAAACACGT CGCCAGGAAG TGCTATAAAT GCGAATGGCA ATTTGCCGGA TCTCACAGGC 
CTTCAAGACA TGTTTGCTCC TCGCAAAGTC GAAAGATCAT AAGCCGCCGC CTTTGCAATT 
GTTAAAGTCA TGACCTAGCA CTGAGCGTAT ATCAGAGTGA ATTCACTATG AAAATAAAAT 
TTAGATGACC GACCGCGAAT CGAATGACAT GAATAGCTCT GCCTTTCGAA ACTTACAATC 
CACCGAAACA CTGAAGAAGC ATTGACCTGC GAATGAAGTC AAGTTTTTAT AGGTAGACCT 
GAATTTTTCG AACCTCCGTT TGTAAAATGA AACCGTGGCC GAATGAGCAT GCAGTATCTG 
CACTGGTTTA CCAACTTTGA ACAGATGCTT TATCTCAAGC TGCCTTTGTC TAGCATTGAC 
CTCGTGAGCC GGCTTTCATA CAAGTTTAAG GCTCAATTAT CGGGAGGTGC TGCGTAGTAG 
CTCTTTCACT AAGACGTCCT GAACTATTCC AATGGAATTC CTGCTTACTG TTAGCTGCTT 
TAGTAATCTA GTGTACCAAT CAATCGCATG TCCTCAACGG TAGCACATTT ACAAAGGGCA 
TTCGTGTGGG TGTAGGGGCA GGAGTTGCAG TGAAGCCTTT TTATATCAGC ACGGTCGAAT 
TCTGAAATGG CCTTAGCGGG ATAGATGTGA AGATTCCAGA CAGAATGATA CTGATGCCGA 
AAGGATTAAC CATCTTGCTC TTTTATTGAA GTGCGCTAGG GTCATGATAT GCGCTATGTC 
GTTG 

 

Protein sequence

MIGYRAHLCE SPSELTFLVS RAVDETSRWQ VNQKGPVTER RFGESQGFPE LVEVKKKVTM 
EAQGQQEKAV LSGTAKAKEE QESDENPPSA DNTWNASNTQ EQNRRPSVFD VFDGLQANRP 
SADLSYSPSS LESESRAKRQ TVETVNDPSV RNGVVLQQEK TPPRVPNPVH NRNVSWGQND 
IFTDGLPPLP RLRKPSQDFY GFQNLQQPDL NSNLQSNEFS IANIDIRRRL NSVGNKLDLE 
DVTQRNPLES EAETYILKVL ESRDPTTSRP RSDSEANTTV LSEVPDEALQ ALVDDAEVDA 
PSQEDPSALS PRASLESSGA TKSTKVLATA KLNRHRRTET MEQKLFGLTT AIGAINSLHN 
DAYHFVGNTP ISPTVYKEST DPLLSSVTEE PTSSGDMFGK NASILYRRAN APKKEDNAVQ 
SIGDANIANE DSSLGTATSR WRLLKQAIHG DTIANPKKTD EEGVGEEADE EVGIQSDGET 
GEENKKLDDR GSNPTGVAAD GEEEDTEEEA HVANAIRRDW EIFKEFQDFF SPRRNSIKQY 
LRSLILYFLL PTISVAAILF HLAGNPPTGI VSSDLPFLNG TLASRDGESI NPDKASASWW 
LLFVCRQAIT FSLAKGMELF IVDFLSVRTK ATIRLLGPWA TLFILQSRGW PFVLFMWGVF 
NFSMLSGARP FFSHWLYWQD LFDLFNESNP GGNVVDSEWN HRLLAIAVSV SAVVSVKRFW 
LGLYLGRQTF TRYSDKLASV MKKILLVSEV ASLGRDFEKY VLGHTKGSTR APPSASMFGI 
SGDKLTGFLN SMNDDSSSIG SNSRFRSERS YGTDLNDPDL VIDPEDRHPL TGSLSAGQKT 
KIIQLLGAWE EPTIAEQSAG RVSVNALLQF RRALACLRTH YPFSGSFGLA DTRELCIESA 
QEVYTRLLLR TPDNSTLTFE ILALLSVQRD GTLDHHKIKD LIRLFRPDRD GTLKVLDFVK 
SVDSVYKELR LLRASVANSS KIDQAFENIF NIVFYAIVIT VLLSQLGFDP LALFLSISGV 
VLGFAFMIST ASSKYFEGLL FILVRRPYEI GDGIHVSNIE TDTSFTGSAW WTVEDVTLFT 
TSVVFMFTGE RATLSNGSLA NSRVINSSRS PEAYLYILLK FPMGVSYDHL QIFNKALEQF 
FRNRPREWLS YVSFRATRVE ADANFVEYIV VGQHRASWAD WTALMLSKAD LMHFSLELSK 
KLNIWYRSPP LPVDLSVVSQ GGGLNLPGSS PSGPLPSVPN ISAPNTSPGS AINANGNLPD 
LTGLQDMFAP RKVERS