| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45221 |
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| Symbol | |
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| ID | 7200102 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | - |
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| Start bp | 522772 |
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| End bp | 526565 |
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| Gene Length | 3794 bp |
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| Protein Length | 1064 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179450 |
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| Protein GI | 219117311 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAAGAGACAC ACATACACCT TGCCAAGTCC TCAACGTACC AAGGCAGTCT GTCTCCACTC
TAAACTTCCA GCCGAAAATC CTACAGAAAT AGCTCACAGT CACTGCGTTG ACCATGGCAG
AAGACGACGA AAGGAGAAAG GTAGACAAAA GCGTAGAGCG AGAATTTTCG CAACAAAGGA
ATGACCAATC CATTCTATTG GACGCGTTGG AAGGATTGAG TGCTGGAATG TCGCCTGTAC
AGCCCTCGCT GGCCATTGCC AAACCTCGTC GTGATCGGTA AGTTAGGTGC TCGCACTCGG
AAATGAATTC AGTATCACTG CACTTTAATT CATAAGTCTG ATATCTGCTC CCGATCTGGT
TATAGAACTG TTTCCTGGGA CATCAATGTT CCAGCTGACC TCATCGATGC ACCACCCAAC
CACGACTTGT CTCCTGTGAC TCCTCCGCAA TCGAGCAACG TGACCACTGG TAAACTCTCT
TTGAAGGACA TCAAGGATTC GTCGCCAATA GAAGATGAAG CGGTACGTTA AAAGATTTGA
GTGCTATATA ACCAATAAAG GGACAAAGTC AAACCTTTCC ACTAACGACG CTTTATATCA
TTTCCGTTGT CAGGAAAGCT ATATTCATCG AGCGTTGGAG GAAAGCGATC CAACCAGATC
TGGCGAGAGC GAAGCCCAAA AGAATCTTCT TGGTGCGGAA GTCCCAAAAT ACCGCTTTGA
AGATGCGCCG TCCTCTCCTG TTCCTTCGAC GTCTTCAAAG GCGTCCCAAA AATCCCATGT
ATCAAAATCT CACCGCAAAA CGCTTAGCAC TGGAGACGCC CTCTTTAATT TAGCGGCAGA
AATGCGTCAG ATGCAGAATC AAAGTGTTTC CGAGTCCTTC GACGGGGTGA AAAACGGAAC
AACAAGCGCG GATATGTTTG CGACCAACGC CATCGCTCTC ATGAAGAGAA ATAAAGCAAA
AAAAGAAGAG GAAACAAAAA GCGCAGCCGC CGTCGCTGCG GTGAGAGAAA CTTTTGATCC
CGCCAGCAAG TGGAAAAAAC TTCGCACGGC TGTGCGAGCA TCAAACATGG TCGATTCTAA
AAAGACAGAC GAAGCAGTCG ATCCTTTGGA AAACGATGAT GGCGATCAGC AAGTCGATCT
TGAAAGTGGT GTTTCAGGAA AGGGAGAGAC GAAGCAAAAT AGTTCTGATA ATTTACGACG
CTCGAAAAAG AAAAGTCAAA TCAATGAAGA TTTTAAATCA GATTTTCAAG ACTTTGAGGA
ATGGTTGAAG TTCCGCAAGG GAAACGCACT TCGCTTCGTT AAGAACGTGC TTTTCTTTAT
CATCTTCCCG GCAACTGGGA TTGCTGCCAT TCTGTTCTAC CTGGCGGATA ACCCGCCATG
TGGCTCACAA GAGGAATGTA TTGCAGAGCA GCACCCTGTG GATGTGAAAA CTCCCATGCC
TGTGGCAAAT ACTACTGACC CGGGAGATTC CGGTCTAGGA TCCATCGGAA ACTTCTTTCG
TGTGGACCGT TCAAATCAAG CTAGTGCATC GTTTTGGATT TTGTTCATTG GAGTCCGGCA
AGTGATTACT TTTTCATTGG CCAAAATGTC ACAAGCGGTC GTAATCGACT TCTTCGCCTT
ACGAACCCGT TTGTTTGTGA AGGTGCTGGG ACCTTACGCA ACTTTATGGA CCGTACAATC
ACGTGGCTGG CCATTCTTAC TCACATGGTG GGTTTTGTAC GATTTCTTTC TACTTTTCGG
AAACAACAAA TTTGCTCGTC ACTGGTAAGT GTGACTGTGC TACAATCTAC GATTTTGACA
TGATATATTG CTAACCGGTA GCACTGCCCA ATCCAATCCA GGCTTTTTTG GCAGGACACA
ATTGGCCTTT TTAATTTCGA AAACCCAGCC GGCGGTGTTT TGAACAGCAA AGCGTACCAA
ACAGTTCTCA TTTTGGCCGC ATCCATTGGC GTTGCTATCA CTGCGAAGCG TTTTTGGGTT
GGACTGTTCC TGGGCCGACA GACCTTTGAT CGATATGCGA ATGATCTTGC GGTTATTATG
CGAAAAGCTT TGCTGGTTGG TCAAATTGCT ACGCTCGCGA GAGATATGGA GAAATACGAT
TTCAGTATGA ACGACTATCA TGTGGAGCAT TCTGTCGCAT ATAAGAAGAC AATGGAACAG
AACGTTGCGG AATTAGACGG CGGCGAATCA GTGGGTAGTG GTGGTAATGC ATCCAAAAGC
CAACGGTCAA TTCTTGCCAG CACGGTTGAT TACAATGCTT CTATTCGCGT TAAGATCAAC
GAAGTCCTTG GTGCATGGGA GGAGCCGACA CTTCTGGATA AGAGTAATGT ATGTGCTAAA
GGATTTGGAC GATGATATGG GCTTTTCCGA CTAATCTTAT CCTTCCTCTC TTGACATAGG
ATATCGTCAG CATTAGCTCG ATTATACAAT TTCGTCAATC CCTTTCCTGT CTCAACACAA
CGTTCCCATT TTCAGTTGCC TTCGGACCTG CAGACAGTCG TACAACGTGC ATTTCTTCCG
TGGAAACGGT GTATCAGCGA TTGCTTGGAC GCACTCCAAG TAATGAAGCT TTAAACTTTG
ATGTGCTTGC ACTAGTTGCA GTCGATCGCG ACGGATCACT AGACGAGGCG AAATTGAAAG
AAGTGGTGAA AATATTTCGG CCCGACCGCG AAGGCAATCT CTCGCTGATT GATTTTGCCA
AGTCAGTTGA CAGTGTTTAC AAGGAACTAC GATTGCTGCG CGCTTCGGTC GCTAATTCGT
CCAAAATGGA CAAGGCGTTC GAGCGTATCA TCAACATTTT GTTCTACTTC ATAGTTGGAT
GTATTTCGCT TGGGGTAATG GGTGTGGATC CTCTCGCTCT TTTCGGATCT GTCTCTGCCT
TTGTTCTGGG TTTTGCTTTC ATGATCGGAG CGGCATGTTC TAAGTATTTT GAGGGTCTCC
TGCTTATTTT GGTACGCCGT CCCTTCGACA TTGGCGACCG CATCCACGTG AGCGACGTAA
ACAATGACAC CAGCTTCTCT GGCTCTCCGA CTTGGTTTGT GCGGGACGTC ACTCTATTTG
CTACGACAGT GGTCTTTGCG GCTACCAACG AAGTCGCTAC CTACTCGAAT GGGTCGCTCG
CCAGTAGCCG CATAATCAAT GCTGCGCGTT CGCCACAGGC TGTCTTGTAT TTCAACCTCA
AATTTCCCAT CAACACACCA TATTCAAAAT TCAAAATCTT CAAGGCTGCT TTGGAGAAAT
TTGTCAAGGC GCGTCCTCGG CAGTGGTTGA GTTTTTCAGC CTTCCGCGCT ACTCGCGTGG
AGGCGGATGC TGGATTTGTT GAGTACATTG TAGTGGGACA GCATCGCGAA TCGTGGCAGA
ATGTGGGAGC CTTGCTAGAC AGCAAGGCAG AGTTATCCAG CTTTGCTTTG GAGCTGTCAA
AGCGTATGAA TATGCGCTAT CGCGCGCCAC CTTTACCGGT GGACCTCAGT ATGCGAGCTG
CTGGAAATGG AGGTCCACTC AACGACATGC TTGCACAACA GATGCAAGCA GGCGACCAAT
TTGGCTCTTC AGATGGAGAC GGTGCCAATG AAGACGGGTC CCAGAGCACG TACGATATCG
GAGCGATCGA GTCCATGTTT GAAAAACCTA AATAAGGTGC ATCAATCCAA AAGCATACAG
CGTACCCACT TCATATGACT TCCCCACGTG AAGCCACATG CAGCACATTT ATATTTAAAT
AGAATGCTAT GACAAGAAAA GGACAAGACA CAGTAGAAAA GAAAATACTA GTAACCTCAA
CAGCAATCGA TTGT
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| Protein sequence | MAEDDERRKV DKSVEREFSQ QRNDQSILLD ALEGLSAGMS PVQPSLAIAK PRRDRTVSWD
INVPADLIDA PPNHDLSPVT PPQSSNVTTG KLSLKDIKDS SPIEDEAESY IHRALEESDP
TRSGESEAQK NLLGAEVPKY RFEDAPSSPV PSTSSKASQK SHVSKSHRKT LSTGDALFNL
AAEMRQMQNQ SVSESFDGVK NGTTSADMFA TNAIALMKRN KAKKEEETKS AAAVAAVRET
FDPASKWKKL RTAVRASNMV DSKKTDEAVD PLENDDGDQQ VDLESGVSGK GETKQNSSDN
LRRSKKKSQI NEDFKSDFQD FEEWLKFRKG NALRFVKNVL FFIIFPATGI AAILFYLADN
PPCGSQEECI AEQHPVDVKT PMPVANTTDP GDSGLGSIGN FFRVDRSNQA SASFWILFIG
VRQVITFSLA KMSQAVVIDF FALRTRLFVK VLGPYATLWT VQSRGWPFLL TWWVLYDFFL
LFGNNKFARH WLFWQDTIGL FNFENPAGGV LNSKAYQTVL ILAASIGVAI TAKRFWVGLF
LGRQTFDRYA NDLAVIMRKA LLVGQIATLA RDMEKYDFSM NDYHVEHSVA YKKTMEQNVA
ELDGGESVGS GGNASKSQRS ILASTVDYNA SIRVKINEVL GAWEEPTLLD KSNDIVSISS
IIQFRQSLSC LNTTFPFSVA FGPADSRTTC ISSVETVYQR LLGRTPSNEA LNFDVLALVA
VDRDGSLDEA KLKEVVKIFR PDREGNLSLI DFAKSVDSVY KELRLLRASV ANSSKMDKAF
ERIINILFYF IVGCISLGVM GVDPLALFGS VSAFVLGFAF MIGAACSKYF EGLLLILVRR
PFDIGDRIHV SDVNNDTSFS GSPTWFVRDV TLFATTVVFA ATNEVATYSN GSLASSRIIN
AARSPQAVLY FNLKFPINTP YSKFKIFKAA LEKFVKARPR QWLSFSAFRA TRVEADAGFV
EYIVVGQHRE SWQNVGALLD SKAELSSFAL ELSKRMNMRY RAPPLPVDLS MRAAGNGGPL
NDMLAQQMQA GDQFGSSDGD GANEDGSQST YDIGAIESMF EKPK
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