Gene PHATRDRAFT_45185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45185 
Symbol 
ID7200357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp434205 
End bp435119 
Gene Length915 bp 
Protein Length304 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179428 
Protein GI219117267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.778315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTATC GCACGACGCG ATCACGGGAA AAGAGCAAAG ATTTGAACAG ATCAAAGAAG 
ATGCAGTACC ACTTATTTAA TGCCATCCTT GGCCTGGTTG CTGCCTTTTT AATAGGTCGC
CTGCCCTTTG TCTCAACGGA GAAATTGCAC GGAGCGAGTG AATGCGATTC TTCTGCGGTC
ACTCCGATTA CCGTTCTTGT GGTCGGGGCA ACTGGCGCTA CAGGCAAGCA TGTTGTTCAG
CAACTGTTGG AGATGGGGCA CAATGTCAGG GTTGTTGTCC GATCCCGACG ACGCATGCTT
GATATGGTCG ATTTTCAACC AAGCGATCAT TTTGTCGTCA CGGAAGCCTC AATTCTTGAA
CTTGGCGACG AAGATCTAAA GCAAGAAGTA GAAGGCGTCG ATGCTGTTGT AAGCTGCCTA
GGTCATAACA TGGACTTCAA TGGCATTTTT GGACAGCCAC GCAGCCTGGT GTCTTTAGCT
ACGTCGAAAT TGACGGAAAC CATGAAAGCC ACCGCGAAAG CTGGTCGGCC AAAAAAGTTC
ATTCTAATGA ATTCTGACGG TGTCGCGCAT CCCGCTGGCA CCGATGACAC GCGGCCAGTT
CTGGAGCGTA TACTTTTGGG AGTACTTCGA CTCCTCATTC CACCTGTGAA AGACAACGAA
AAGGCGGCCA AAGTCGTTCA TGAATTCCAA AGCAATGGTA CGATTGAGTG GGTTGTCATT
CGTCCAACAG ACCTAATTGA TGGTCAACCT ACAGAGTACG TTCTTTACGA CAAGCCGGTT
GGGTCGCTAT TTGGTGGAGG GGTAACTACG CGAGCAACCG TGGCCAAGTG TATTGTGGAC
CTGATTCTGG ATCAAGTACT ATGGGAGAAG TTCAAATTTC AAATGCCTGT GTTGCATGAC
TCCAAGCAGA ACTAG
 
Protein sequence
MFYRTTRSRE KSKDLNRSKK MQYHLFNAIL GLVAAFLIGR LPFVSTEKLH GASECDSSAV 
TPITVLVVGA TGATGKHVVQ QLLEMGHNVR VVVRSRRRML DMVDFQPSDH FVVTEASILE
LGDEDLKQEV EGVDAVVSCL GHNMDFNGIF GQPRSLVSLA TSKLTETMKA TAKAGRPKKF
ILMNSDGVAH PAGTDDTRPV LERILLGVLR LLIPPVKDNE KAAKVVHEFQ SNGTIEWVVI
RPTDLIDGQP TEYVLYDKPV GSLFGGGVTT RATVAKCIVD LILDQVLWEK FKFQMPVLHD
SKQN