Gene PHATRDRAFT_45116 details

Gene Information

• Locus tag: PHATRDRAFT_45116
• ID: 7200310
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: -
• Start bp: 240796
• End bp: 246731
• Gene Length: 5936 bp
• Protein Length: 1843 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002179389
• Protein GI: 219117189

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.116099
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCTCTTCCA TCGCTTCTTT CCACATGACC TCTAACTGTC GACAATTCCT TTTGCTGCTT 
TGGAAAAAGG ACCGCTCAAT TGTTATCGTC TGAATACATC TCACTCCTTT GTTTTTAATT 
TATCACGAAA AGAGTTTGTA AGGAAAGAAT ATGGGTCGCT CTAAGTCCAC TCCTTTACAA 
AAGGTTCCTA GTGAAGAGAA AGAAGTCTTC GGACGCAGGG AAGTTGGCGA CTCTACTTTC 
CGTGCTCTAT TCGCGGGTGA ACCCGTCGGG ACCGACAAAT CATGTATGCC TTCTCACGAT 
AAAACGACGC CACTTCGCAC AGTCCACGCA ACACCATCTC AAACGCAAAA CCCCAAAGCA 
AAGAAGAGAT CAAAGAAGCA AGTAAGTTTT AAGCCGGAAA ACCAAGGATT TATTTCTTCA 
ATCGAGGTTC CGGAAATATC TATTGAGGTT GTCGAGGATT CCCAATCCGG CAGAAATGTT 
TTCATCTTTT ATCGATTTCA GCAGGACGAT AGTAACCGTT CAGGAAATAG CTCTATATTC 
ACGAAAGCAC TAAAGCTTCC CGAGGCAACT GTACAAACGG ACAAAGACCT GGGGGTGGAC 
AAGCCACTCT GTTTGCCAGT ACGGACGTCT TTGGGCGCTT TTGACTTATG GAAGGCTTTT 
CAGCTTCCTT TACTTGGGAA AAGCCCAAAG ATCTTTCAAG AAATTCTGGA CAGTAATCTC 
ATAATTCTCT TCCTGAGACG TTCAGACACA AACAATTGGT GTCTGGATGT TTCACTCACG 
GAGAAAGCAC TGGATTGCTG TCGCCCTGAA GTGCTGCCTA TAAGACGGCC GGCAAACGCG 
AGGCGTTACA GCGCTGCCAA CAGCATCCAC TCAGTCCTTG CTGCTCTCTT TCCAGACACC 
ATTATTCATG ATACTTTACC CAACGTGGTG TCTACTATCG ATTTCTCTCC GATTTCTGCC 
CGACAAATAT ACGCATTGAC TGATAACAAG CAGCTCATCA CTCATTTAGA ACGGGAAAGC 
GTACCTGATG ACCTCGTCAT TCCAGATCTC AAACCTAAAT TACGTCCGTA TCAAGCTGAA 
GCTGTGAAAT GGATGTTAGA ACGTGAGCGG TCGAAAGCCG AAGGTGAGGA GTGGAAATTG 
GCTTGGGTAG GGTTGAGACC CTTCGGAGAT CCTTTACCAT TGAGTCAAGT CGCGGAAGAT 
GATCGACATG GCAATATCTT CTTCTCACCT TTTGTTGGGT GGATTACGAG AACTTATTCA 
GCTGCCAAAT CAATGATGGC GGACAACATG CCTCAACCGA GAGGTGGGAT TTTGGCTGAG 
TCGATGGGCT TAGGAAAAAC TGTAGAAGTA TTGTCTTGCA TCTTGGCCAA TCGAAGACCA 
ACAGTCGCAT CTTTACCTGT ACCTTTTGCG AGACGGAACC TTGATTCCGA ATTTAGTCGG 
TCACGTGACG TCGCTGAGTG TCATGACGAC TTATCTGAAC AGAATCGTTC TACTGAGGTC 
CGAGACGTTG AGTATCGGAA GGAACGCCGA AGTGAAACAT ATTTTAATAA AGGTGACACA 
GTGACGTCAA GAAATCCTCA TCTTGAATCA TTTGCAGGTA TCTCTTGTCT TTCAATTGCG 
GCAACGAACA CCCGTCTGGT AACACCGGAG CCAAAAAGAA ACGATCTCCC CGTGGCGACC 
GAACAGTGGC TTCAGGATGA TTACATTGGA TCATGCATAT GCGGAAAGCT TATTTCCCTT 
CCTGATCTAA AAAAAGAACT GATCATTATA TGTTGCTCCT GTAAAGAGCC TATGCATGAA 
TTTTGTGCAT CATTCGACTC GACAGATGCG TTGATGAAGG CAAGCACCCC ATATACATTT 
CGTCGTTCAC CCTCAGGTCC TGGCAGTCAC TGTAGACTTT CAATGGATGA AGCTTGCTGC 
CCTTGCTGTT TTTTAAGGAA TGGGCAAATG ACCATTAGTA GAGCTACCTT GATTGTTACC 
CCTTCCGCCA TCCTTCGTCA ATGGGAGCAA GAGATTCAAA AGCATACTGT TCAACTCGAA 
GGGCGGTCAA CGAAATGTAT TGTGTATAAT GGCGTGGAAG CAACGTGTAA GATGAAGCAC 
TGGAAGAAAG AGTGCTTTAG TGATGCCATA CAACTTATTC ACCCTGCACG ACTTGCTGAT 
GCTGACATTG TGCTCATAAC TTTCGACACA CTCATGTCAG ATCTAAACCA TTCGGATGAT 
AATCGCTTCC TTGCGGGGAT TCGAAGTGAA CAAGGCAACC TTAGAAGAAG AAAGAGATAC 
CGAGTTGTCC CATCTCCGTT GACGAAAATT CGCTGGTGGC GCATATGTCT TGATGAAGCT 
CAAAGAGTGG AGACACCTAC TGCAAAATCT GCCATCATGG CCTTGAAACT CGAAACCGAT 
CATCGCTGGT GTGTCTCCGG TACCCCCATC GGGCGGGGAA GAGTGGAAGA TCTATATGGA 
TTGCTCCTTT TTCTTCGCAT GCTGCCTTTT CAGGATATTG CGTTGTTTCT AAAATGCTTC 
TCGTTAGCAC ATAGAGGTAT TGAAGAAAGA ATTCAACAAC TCCTTTGCAA GGTATTTTGG 
AGGTCTACCT CCGAGCTTGA TTCAGTTCGA AGACAGATGG GGGTGCCTGA GCAAGTCGAG 
GAAAAGGTTT TGCTACGGTT CTCGTCGATC GAGAAACACT TTTATGAGAG GCAACTTGAG 
CAGACCATCA CCCTGGTTGG TGAAATCACA GAACGAGAGA GCGAGGGGAA AAGATCAAAT 
TCCAACCGAT TGACTACATT GGCTGATCGC CTTCATAAAC TACGTGCAGC ATGTTGCCAT 
CCACAAGTAG GTTCAAGTGG TATAGGGCGG GGTCATGCTT CTAGACTTTT GGGAAAACGC 
CGTGAAGGTT CCATGTCGAG CTTAAATTCG CGAGTTATGA CAATGGATCA GATTCTCGAA 
CGCTTTATCG AGGAGGCAAA GTTAAAGTGT GAGGAGTCAC AGCGTTTAGC CGTCATGCAC 
ACAAACGCCA TGGCAGCTCT ATCAACGCTG AAAATTGAAG CAAAAAAATT CTTTGGAGTA 
AATGTGGAAG AAGAGGATGA GATTTTAATG AAGAAAAGCT GTAAGTTGAC GATCTTTTGT 
TCTAGTCAAT CTCCTTTTTC TAAAATTTTA CATTTTGGTT GACAGGTGAC TTGTATCAGG 
AGTCTCTTAT GCAAACTGAA AAAAATGCTG CACCAACGCT TGTCATAGGG GAAGCGGTTG 
TAACTGGGAT GAAAGGCTTC CAGTCTCCAT ATTCTATTGT CGGGAATGGC AAATTGCGAC 
TGGAATGGAA ATTCTCCAAG AATGCAAACA CAAGCATTTG GGCCCAGATT GATTTTCAAT 
GTGCGAAAAA GTTAACCGAA ATTCGCCTCA GACCCCTGCG CGAGTCTTCC ACCCTAGATG 
TTTTGGTGGA TGGCCAACAA AGATCCCTGT GTCCCAGAGA CTGCACAATA CAGGTTCCTT 
ATCAAGGGGC TGGCGACGAA TGGATCGACG TTTCAAGAAT TTTTCTTTCG GAGTATGCGG 
GATTGAATGA TTGGAGCTTT GCAACGGGAT TTCACACTAA AAAATCGAAG ACTTGGCGAA 
TTTGCCTGTC CGGCTGCTTT CCACCGAGCG AGAAAGAGGT TCATGGACGA CAGGCCACCA 
GTTCCTTAGA ATCTGAGTTC TGTGTCGGAC TTGAATGCGA GCTGTTTGAA GCTACGATTG 
CACAGGATCC TTTACAACGA CTGCATTCCC TGAACAACGG GGCGTTATGT TTGGAAAGAT 
ATGCCGGGAT TTCACAAGAA GGTTCGGCTG TGATAGATCG TGAAGCTTTG ACGGAGCAAG 
TTTTGTGTTC ACGGGCGAAA AGAATGAAAG ACGAAGCATG CCAAATCGAA AGTCTCTATC 
TGGCCTCAGC AAGAGCGACC CATGACAGTT GTAAAAATCA TTTTCAGAAC ATTTCAAGCA 
AGAGATTGTA TCACGATGAA GCACTTGGGA AGTTATCACA ACAAGGAACG CATCTTTCCC 
AGAGTGGTGG AGATTGTTGG GACGAAAAGT GGTGGGACGA GTTTTTGGTT CTTTGCTGTC 
TGTACGGCAA TGAAGGTGAG CAGAGGCAAA TTGTCGAGAG GATTCTGCAA GATTTGGAAG 
GATACACCAG TCGGGGATTC AGCGCTGCTG TGGACACTCA AAACGGCTTT ATACCCTTTC 
CTGACTTCAA CGATATCGCT GGGCTTCGAA CTGCCATGGA CCTGCGAATA CAAGGAATTC 
GAGTAGGCCT TAAGGGCAAA CCGCCACGGA CGAGCAAAAG TGGTTCAAGG GGTTTCAAAA 
TGCGTGAAGC CACAAACAAC TTGGTTGTCC AGGAGACCAG GAAGTTAACG CAGTTTCGAT 
GTCAGCCTGG AATGCACTCA AAGACAATGG CTACTGTTCT TTCCCTAAGT CCTTTCCCTC 
AAAAGGATGA GATTGTTGAA AACAGTTGCT GCAGGGTGTG CAAAGCCGAC TGGAAGCAGA 
CCGGCCCGGA ATGTCGCCAC TGCAAGATTG GTGACGTCCT TGATGAGCTT GAAGTAGACA 
AGGTGACTTT GCTCGTTCTG AGGTCGGTGT ACGCACAGAT CAAATCGATG CTAGAGTCAA 
AGTTTCTCAG GGACGTTGGT ACGCACATAG AAGAAAGAGC CAAAGAATTT TTCAGCGTTC 
TCGAATGGCA GAAACGGGAA AAACTTGCTG CTTCTAGCTT ATGGAGGGTC CACTTGGACT 
TGCTCAACGA CTTGGACGAG TTAAATCAGT GCAAGAGGCC AATGAGACTG CTTCAGGCGG 
GCGAAGATCC AACCAAATTT TCGGATGATG AATTGAACGC GATCGTCTTT CCCGTGGATG 
CGTGCCCCAG GTATCATGAT AGTGCCGCAA AACAAGCCAT GGCTTTGGGT GATCTTCGAC 
GAGCGCATCA ATCGCTACGC TATTTAAAGA ACCAGTGGCA TAGCCGAAAG TATTCCGCGG 
AAGGTGATGA AGAAACCTGT GTTGTATGTT TAAGCGAATT GACGGGGGAG CGAGCGGTTC 
TTCGATGCGG ACATTCGTTT CACTATACTC CTTGCCTAGA AAAGCTTCGT ACAATTTCGG 
GAGAAATCAA ATGTCCACTA CGGTGTACCG TGCGCACAAG CAGAGAGGAT GTGATGGTTG 
CTGTCGAGAA GAGCAGTTCT AATGGAAGTG AAACTCGTCG AGTAGTGAAA GGAAGCTGGG 
GAACAAAAGT CACGAGACTT GTTGCTGATA TCATGGACGT GCAAGATAAA GGAGAAAAAT 
CCATTGTTTT CAGCCAATGG GAAGATATGA TTGATATTTG TCAGCAAGCT CTGGAAGACA 
ACGCTGTTGG GTACACACGT GCAAGAAGCC TAAAAGACCT TAGTGGTAGC GTCAGAGACT 
TGCAGTCTGT GGGTTGCGAT GTTCTACTTT TGAATGTCAA GAAGGCTGCT GAGGGTTTGA 
CTATTTTGGA GGCGTCCCAT GTTTTCCTAG TTGAACCTCT GTTGAATCAC AGTCTTGATA 
GCCAAGGTAC GTCCAACAAA ACGAAAGATT TTGGACTCCG ATTTTCCTAA CAAATATCGG 
TACCTCTGCA TGTGCGCAGC TTTAGCTAGA ATAAATAGAA TTGGACAGAC AAGGTGGGTA 
TGGTGATTAT TTTATTGCTC TGTGGCTGTT AAAAGAGAAA ACTGCTCACT CTTATTTTGC 
TGTCAAACAG GAAAACATAC GTTCACAGAT ACATCATGGA GGACACAATC GAAGTCAAAA 
TCGACAGCTT TAGATTAAAA AATGAAGGTA GCGTACTCCT GGCTAACAAC GACAGCAGAA 
AGCCCTCCAT TAGTGCCGGT GGGGCTGATG GGGGTTTCCA TTCACGAGAT GAGCTCATGA 
ACATTCTCAA TAGCTAGGAA GCTTTATTAA CTTAACATAG GCTAGGTAGG TTGTGT 

 

Protein sequence

MGRSKSTPLQ KVPSEEKEVF GRREVGDSTF RALFAGEPVG TDKSCMPSHD KTTPLRTVHA 
TPSQTQNPKA KKRSKKQVSF KPENQGFISS IEVPEISIEV VEDSQSGRNV FIFYRFQQDD 
SNRSGNSSIF TKALKLPEAT VQTDKDLGVD KPLCLPVRTS LGAFDLWKAF QLPLLGKSPK 
IFQEILDSNL IILFLRRSDT NNWCLDVSLT EKALDCCRPE VLPIRRPANA RRYSAANSIH 
SVLAALFPDT IIHDTLPNVV STIDFSPISA RQIYALTDNK QLITHLERES VPDDLVIPDL 
KPKLRPYQAE AVKWMLERER SKAEGEEWKL AWVGLRPFGD PLPLSQVAED DRHGNIFFSP 
FVGWITRTYS AAKSMMADNM PQPRGGILAE SMGLGKTVEV LSCILANRRP TVASLPVPFA 
RRNLDSEFSR SRDVAECHDD LSEQNRSTEV RDVEYRKERR SETYFNKGDT VTSRNPHLES 
FAGISCLSIA ATNTRLVTPE PKRNDLPVAT EQWLQDDYIG SCICGKLISL PDLKKELIII 
CCSCKEPMHE FCASFDSTDA LMKASTPYTF RRSPSGPGSH CRLSMDEACC PCCFLRNGQM 
TISRATLIVT PSAILRQWEQ EIQKHTVQLE GRSTKCIVYN GVEATCKMKH WKKECFSDAI 
QLIHPARLAD ADIVLITFDT LMSDLNHSDD NRFLAGIRSE QGNLRRRKRY RVVPSPLTKI 
RWWRICLDEA QRVETPTAKS AIMALKLETD HRWCVSGTPI GRGRVEDLYG LLLFLRMLPF 
QDIALFLKCF SLAHRGIEER IQQLLCKVFW RSTSELDSVR RQMGVPEQVE EKVLLRFSSI 
EKHFYERQLE QTITLVGEIT ERESEGKRSN SNRLTTLADR LHKLRAACCH PQVGSSGIGR 
GHASRLLGKR REGSMSSLNS RVMTMDQILE RFIEEAKLKC EESQRLAVMH TNAMAALSTL 
KIEAKKFFGV NVEEEDEILM KKSCDLYQES LMQTEKNAAP TLVIGEAVVT GMKGFQSPYS 
IVGNGKLRLE WKFSKNANTS IWAQIDFQCA KKLTEIRLRP LRESSTLDVL VDGQQRSLCP 
RDCTIQVPYQ GAGDEWIDVS RIFLSEYAGL NDWSFATGFH TKKSKTWRIC LSGCFPPSEK 
EVHGRQATSS LESEFCVGLE CELFEATIAQ DPLQRLHSLN NGALCLERYA GISQEGSAVI 
DREALTEQVL CSRAKRMKDE ACQIESLYLA SARATHDSCK NHFQNISSKR LYHDEALGKL 
SQQGTHLSQS GGDCWDEKWW DEFLVLCCLY GNEGEQRQIV ERILQDLEGY TSRGFSAAVD 
TQNGFIPFPD FNDIAGLRTA MDLRIQGIRV GLKGKPPRTS KSGSRGFKMR EATNNLVVQE 
TRKLTQFRCQ PGMHSKTMAT VLSLSPFPQK DEIVENSCCR VCKADWKQTG PECRHCKIGD 
VLDELEVDKV TLLVLRSVYA QIKSMLESKF LRDVGTHIEE RAKEFFSVLE WQKREKLAAS 
SLWRVHLDLL NDLDELNQCK RPMRLLQAGE DPTKFSDDEL NAIVFPVDAC PRYHDSAAKQ 
AMALGDLRRA HQSLRYLKNQ WHSRKYSAEG DEETCVVCLS ELTGERAVLR CGHSFHYTPC 
LEKLRTISGE IKCPLRCTVR TSREDVMVAV EKSSSNGSET RRVVKGSWGT KVTRLVADIM 
DVQDKGEKSI VFSQWEDMID ICQQALEDNA VGYTRARSLK DLSGSVRDLQ SVGCDVLLLN 
VKKAAEGLTI LEASHVFLVE PLLNHSLDSQ ALARINRIGQ TRKTYVHRYI MEDTIEVKID 
SFRLKNEGSV LLANNDSRKP SISAGGADGG FHSRDELMNI LNS