Gene PHATRDRAFT_45011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45011 
Symbol 
ID7199525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp993221 
End bp994357 
Gene Length1137 bp 
Protein Length376 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178890 
Protein GI219116190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTG CTCAATTCAT TGCTAGCCGA TTGCTGCGAG AGGCTTTACA AGCGGCGATT 
GCCAATGATG CTGATGAGGA TTCCGAAGCG ACTTTCTTTC CGACCAGCGC TCCTACGACG
GAAGATGACT TTCAGCGTCG AAATTGGATG ATGTACAATA TAGCCATGGT CAAGAAACCT
TTGCTTACCG GCGTGGGCGT CTTGATTGGA CTCGTCATGA TCGCGTACGG CTTCATGCAC
CTTTTGGAGC GTCTGAACGT GTGCGAACGG GTGGACATGC AACGCGCTGA GCGTAAGAAA
TCGGACGGAT TATGGGACAT TCAAGAATCT GAGCGACGCA AAATCCTTCT ATTCCTTTTC
CGGAAACAAG CCAAGACAGT GTTTCGCTTC AAACGGGAAG AGGGAGGAAA AGCGGTGGTA
GACGAAACAA CGACGCAACC TCTTTCGCAA CAGAGCACAA TGCCAGAGGA CGCTAACAGG
GATATTTGTG TTTCACTGAA CCAAGAGTCG ACCGGAACGA CAATCAATGG GCGCCAAGCA
TCATGCTGCA TCTCAGGAAG CGTTATTCAA AAATCTGCCA TTCCCCCCGA TACAACCGAT
TGTGGTCAGG TTTCCACTGC GGATGAGTCT GAGAATGTCA CTACAAGCGA AAAGAATGTG
TCACATCCTC TGAATGGTAG CTCCACAAAA GCGAGCCCGG ATGCTGTTTT ATACGACCAA
GAACAGAAGG AGACAGTCGC ATCCATTTTG GTTGCTCCCA ATGAGGAACT AGACAGCAGT
ACAAACGCTG CCGATGACGA AAACGACAAC AACCTGTCAT ACGAAGAGGT CATATCAGAA
CCCAGTACAG ACAGTCTGGA ATACGTCTGT TCCATCTGCC TTTCGGACTA CGAAGATGGA
TGCAAGGTAA TGACAGGTAC TGCCTGTCAA CACGTCTTTC ACATGGAATG TGCAATGGAA
TGGCTACAGA AGCACTCGCA TTGTCCTTAC TGTCGGGAAC CAATGATGAG CCGGGACGAA
TTTCGCTTGG CAGCCATGCA AGTTCTAGGT TTAGTCCGAT GTCGGGAGCT TGGCATTCTT
GCAGACCCTT CTACGGATAC AGAAAGAGGC GAAAGTGACA GCCCCGTTTA GTACACG
 
Protein sequence
MSTAQFIASR LLREALQAAI ANDADEDSEA TFFPTSAPTT EDDFQRRNWM MYNIAMVKKP 
LLTGVGVLIG LVMIAYGFMH LLERLNVCER VDMQRAERKK SDGLWDIQES ERRKILLFLF
RKQAKTVFRF KREEGGKAVV DETTTQPLSQ QSTMPEDANR DICVSLNQES TGTTINGRQA
SCCISGSVIQ KSAIPPDTTD CGQVSTADES ENVTTSEKNV SHPLNGSSTK ASPDAVLYDQ
EQKETVASIL VAPNEELDSS TNAADDENDN NLSYEEVISE PSTDSLEYVC SICLSDYEDG
CKVMTGTACQ HVFHMECAME WLQKHSHCPY CREPMMSRDE FRLAAMQVLG LVRCRELGIL
ADPSTDTERG ESDSPV