Gene PHATRDRAFT_44979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44979 
Symbol 
ID7199655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand- 
Start bp878498 
End bp879273 
Gene Length776 bp 
Protein Length210 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179080 
Protein GI219116570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTCAA CTTCTCCCAC TTCTTCGTCG TCGACGTTCA CAGCCACAGC CCTTTTAGTT 
GGAATGGCAT TGGCACTTTC ATGCTCTAAA AAAGTGGAAC AAAGACGGCG CAGCTACGCA 
CGTACGGCCG AAAAGAATAA CCTCTGCGAA CGCTTCGCGG CTCCTCGTCG CTACGGTGCC 
GCGATCCGTC TGCATCCGGA AGCGTATCGA AGGTACCGAG ACTTGCACGA CAATGTATGG 
GACCAAGTAT TGAATCGGAT GCGCCGTTCA CACATTCGGA ATTTTACTAT CTATTACCAC 
GAAGAGACGC AGACTCTGTT TCAGCATTTC GAATGGATCG GTCACTGGCG TCCTGGTGTG 
CATACACGCG CCCAAGAGGC CACTCTCTTT CGAGCGGATA TGCAGGCGAT TGCTGATGAT 
CCTGTCACCA AGAGGTGGTG GAAGGAATGC GAACCGTGCC AAATTCCCTT TCGCGACCCA 
CAACAGACGC CACCTTCGGC CGGTGGACAG GGAGAATGGT GGACGCCTCT GGAATGTGTG 
AATCATTGCG GGCTTTGGCC AACTGCGTAT TCCCAGCAAG ACAGGGATCC GGACTTTGTG 
AAGCGGAACA AGGCTGATGT AGCATATTTA TAGCCGTGGG AGTGGACACG AATCATGCAT 
TGATAGAAGT AAGTTCTACA GAACGTACGC TTTCCTTGCC TTTTAGGAAA AGTACAGACT 
ATTTCCAATG GTACATGACC GTTTACTGCT AAATGTAAGC AAAATAGAAA GTTTAC
 
Protein sequence
MVSTSPTSSS STFTATALLV GMALALSCSK KVEQRRRSYA RTAEKNNLCE RFAAPRRYGA 
AIRLHPEAYR RYRDLHDNVW DQVLNRMRRS HIRNFTIYYH EETQTLFQHF EWIGHWRPGV 
HTRAQEATLF RADMQAIADD PVTKRWWKEC EPCQIPFRDP QQTPPSAGGQ GEWWTPLECV 
NHCGLWPTAY SQQDRDPDFV KRNKADVAYL