| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34543 |
|---|
| Symbol | |
|---|
| ID | 7199500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | + |
|---|
| Start bp | 869184 |
|---|
| End bp | 870527 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178864 |
|---|
| Protein GI | 219116138 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAG ACGACAATGG GCACCGCTTT TCTGCGGCCG AACGAAAGCA CAGACTGTGT
ATAGTCCTTC AATTCCTCTT CTCAAAGAAC AGGACAGAAA TGGCTCCCTG GCCCGAACAA
CAAGCGCGAG AGTGGTACGA GTCGCAGGGT TGGCGACAGG GGGCCAATTT TATCCCCAGT
ACGGCCGCCA ATCAAATCGA AATGTGGCAG AATTTTGACG AAGAAACCAT CCAACGAGAA
CTCAGCTGGG TTTCCCGCAT AGGTTATAAC GCAGTACGAG TCTTCCTTCA CGATTTGGTC
TGGAAGCACG AAAAGGAAGA CTTCTTCGAC AAGGTGGACC GATTCCTGAC TCTCGCGGAC
GGCCTAGGCA TTCGGACAAT TCTGGTACTA CTTGAGGGGA TTTGGGATCC AGTCCCAACA
TATACAGAAA ATCAGTCGCA GCTGCCTCCA CGACCGGCTG TCCATAACAG CCGCTGGCTG
CAATCTCCAG GTCGACATGT TTTGGAGAAT AAAACTCTGC ACGAATCTTA TTTGCGTCTT
TACGTGGAAC AGGTTATTGG CAGATTTGGA AATGATACCA GAGTATTAAT GCTCGATTTG
TTTGACCAAC CTGAAAATGA CAACCGAAAG TCGTACGGAT CGTATGGAAA TCGTGTGGAG
GTTTGCCAAG ACGCTCTCGG GACCGAAATG AGCGGAGACT TAAAGGCCCA ACTCATCAAG
GAGCTGGTGC CGAGATTGCT GAACTGGGTA TGGTCTCTGG GACCAAGATC CGTTCCCTTC
ACTATCCCAG CGTGGACTGC TGTTGATGAC AATGATGACT CTAATTACGG AAAGATACAA
GGCGAACTCC GCCATCTGTA TTTGAACTCG TCAGATATTA TTACGTTCCA CAATTACGCA
AACCTTACTC AACTGCTGAA CGTGTTGGGC GAAATACGTG ATGTCTATCC AGGTCGTCCT
GTCGCGTTGT CTTCCTTCAT GGCCCGTGAG TCACATAGCA CGTTGGATCC GATTCTGCAA
AGAATGTATC AAGAAAATGT TTGGGCTTTG CATTGGGGCT TTGTAGCTGG AAAGATACAA
ACAATATATC CTTCAGACTC GTGGAACATT GAATACTCAG TCAAAAAGGA ACCCCTTCCC
TGGCATCATG ATTTGTTACG GCCCAACGGA ACGTTTTATT CCAAGTCCGA ACAAGCCTAT
CTGTCCTCCT TCCGGAGTTC CTTACCAACG TACAGAATTG GCGAAACAGG ATGGGATTCA
GTATCTGTCA CCGCTTTGGC AGGCTGCTTA CTCGTTTTGC TTACAGTCTT GCTACTGTTG
AGGAATAAGT TTCCCCTTAT CTAG
|
|---|
| Protein sequence | MFEDDNGHRF SAAERKHRLC IVLQFLFSKN RTEMAPWPEQ QAREWYESQG WRQGANFIPS
TAANQIEMWQ NFDEETIQRE LSWVSRIGYN AVRVFLHDLV WKHEKEDFFD KVDRFLTLAD
GLGIRTILVL LEGIWDPVPT YTENQSQLPP RPAVHNSRWL QSPGRHVLEN KTLHESYLRL
YVEQVIGRFG NDTRVLMLDL FDQPENDNRK SYGSYGNRVE VCQDALGTEM SGDLKAQLIK
ELVPRLLNWV WSLGPRSVPF TIPAWTAVDD NDDSNYGKIQ GELRHLYLNS SDIITFHNYA
NLTQLLNVLG EIRDVYPGRP VALSSFMARE SHSTLDPILQ RMYQENVWAL HWGFVAGKIQ
TIYPSDSWNI EYSVKKEPLP WHHDLLRPNG TFYSKSEQAY LSSFRSSLPT YRIGETGWDS
VSVTALAGCL LVLLTVLLLL RNKFPLI
|
|---|
| |