| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34273 |
|---|
| Symbol | |
|---|
| ID | 7199734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | + |
|---|
| Start bp | 186042 |
|---|
| End bp | 188506 |
|---|
| Gene Length | 2465 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178721 |
|---|
| Protein GI | 219115852 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.842381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACC TTTACAGGCA GGTCAGGGAG ACGGCGATCG CCAATGAGAG TCCTACCGAT
TCTTCACCGC ACGAGATCGC TGCTCCAAAG TAATTTCTGT TCCACCGCAA GCTTCGACGT
TGAAAGCGAA CAACGTTCGA AGAAACCAAC CAGAGGCAAC GTCGAGCTCC ACATCTACAC
CGACATAACG ACGTGCCGTC TCGTTTCTGA CTCGCCCCTG GACACCGCTG GTAGTATTGA
TCCAAACTAT TTTCCGAAAC AATTAAATAT ATCCATAATA GACTGCTGCT TTTGGAAGGC
TTAATGTCAT TTGTCGTGGC CCAAGCGGGT AACCCTTCGC GACGGACGGT CAATTGAACA
GTGTGTTTCC CGATCTACCT GATTTCGGGG CAACGTACGA GGACAAGCAC TCGGGCATCC
AAGGCGGGTG GATCCATGTA AGCATTTCGG AGACCACCGA GGTCAAGAAC CGAGGCGGCG
TGGGCACTCT ATCCTTTGAT AAGAACGGAG ATCTTGTGGA CTACAAGATG GTGCTGGAAG
GCACCACGGC GAATTGCGCC GGTGGAAAGA CCCCATGGGA CGGCTGGGTG TCGTGTGAAG
AATGTCGTCT AGCCATACAC TGGCAAGTCG ATCCCACTGG TACACGGGAA TCTAAGTTAC
ATCAATTTGC TCGGCAACGA TGCGGTCACT TTGAAGCGTT TGCATACGAT GTTCGCAACC
GAGAAATGCC GCACTTCTTT GTTACGGAAG ATCACTCTAA GGGTGCGCTG CGCCGTTTTA
CTCCCGACAG TGCCGATTGG AATGACCCGT GGAACATATT GTATGGTCCT GGCCTCATTG
AGTTCCTCAT CGTGACGCCC GACTCCTCTG GTACAGCGGG ACGCTTCGAA TGGACGCGTG
ACCACAATGC AGGCAAGAAG AATGCTGAGA AGCACTTTCC GAATACGGAA GGGATGGATG
TGTACGAAAA TGAGCTGTAT TTTGTAACGA AACGCTTCAA GTCCATGTTT ATATTGAATT
TAGACACGGG AACGTATACA AATCAGACGA CACGCAGCGG CTTGTTTGAT GGTGGTCCGG
ATCAATTACA GCGGATCTTG GGAGACGAAG GCGAAATATT GTACTTTACA GAATCTGGCG
GACGCGATGC TGGTATTCAC GGTCGTAATG CTAAGGGCCA GTATTTTACC ATCCTGGAAA
GCCCAGTGTA CGAAGACGAG ACGAGCGGGC TCGCATTCTC TCCGGATGCG ACGCGCATGT
ACGTGGCGTA CCAGAATATT GGCATTTTGT TCGAGATTCG TCGCGAAGAT GGCCTACCAT
TTGACGAGAA GTCACTGAAC GTCAAGTATC ACTCGACCTC CTAAAGTACG TTATCATAAA
GCTAGCATTA ATGCAACGAT GAGACCAATG AACATTTCTA ACTGTAAAGG AGATTTTTCG
CGGTAGAGCA ATTCGGCTTC TACTCTCTAG AACTCTCTTC ATGTAAACAA CATAAGCCCC
GTTTGTTCTC TTTACGTAGG TTACGCTTGT TTTCAAAGGT CAACCACATG CTGCTAGCTA
CCGGTAGTCC AATGACGTTT TTTCGGGAAC AACGTTCACA ATATTTGATT AGGATTGCGG
GTCACGATCG TACGGGATCC ACTTGTCTGA CTGGGAAAGG TAGGTCGGAT GGCTCCTTCC
ATACCGTGAC GATCCATGTG AACGGGCAGC GTAGCATGCG AACCAGTCCT GTTAGCCTTT
GTCTTGTATT CGTTTGCGGA ATGCTTTCAC GGGCTGTTTC CCTAGGTACG GTGCGAAGCT
ACCAGTCTTG CGGCAACGGG CTGTCCCGGA CCGTATCATC AGTTCGATGC GTCCCGCCGA
TTGGATCGAC GACTTTTACA AGCACCAGCA CCAGGACGAC GACGACAGCT TCCAAGCACT
CCAACTGCGA CGACAATCCA CACCGAGACC ATCCGTCCGA TACAACGGGA CATTGCAAAA
GGTACCGCCT CCGGGGGACG ACTCTACCAA ACAATAAGAG CGGCGTCCGT GTCACCACCA
ACACGGGACA CGTTCTGCAA ACGGACCTAC CGCGCATCAT GGGCGGACGC GACACGGCTC
CACAACCAAT CGAAACCCTA CTTGCGGCGC TCATGGGATG TACGCAAGCG ACGGCTGTCT
TTGTCGCTCG GAAAATGACT CCACGGGTGG TCTTGGACCG ACTCGAGTTG GCGCTGACGG
CGGAACGGGA TGAGAGGGGC GCTCTGGCGC TGCCGATTGA GACACCGCCG GCAATACCGG
CACGATTGCA ACGGGTCTCG GGAACCGTCA CGTTGTATGC CGCTCGGCAA GAAAGGCTCT
CTACCAACGA GTTGATGCTG TTGCGCGAAC AGACCGAGTT GCGATGTCCA GTGGCGAACC
TGTTGACCGC TAGTGGCTGT GTCATGGAGG TGGAGTGGAT CGATGGCAAC GCCAAACAAG
CCTGA
|
|---|
| Protein sequence | MSNLYRQVRE TAIANESPTD SSPHEIAAPN VFPDLPDFGA TYEDKHSGIQ GGWIHVSISE
TTEVKNRGGV GTLSFDKNGD LVDYKMVLEG TTANCAGGKT PWDGWVSCEE CRLAIHWQVD
PTGTRESKLH QFARQRCGHF EAFAYDVRNR EMPHFFVTED HSKGALRRFT PDSADWNDPW
NILYGPGLIE FLIVTPDSSG TAGRFEWTRD HNAGKKNAEK HFPNTEGMDV YENELYFVTK
RFKSMFILNL DTGTYTNQTT RSGLFDGGPD QLQRILGDEG EILYFTESGG RDAGIHGRNA
KGQYFTILES PVYEDETSGL AFSPDATRMY VAYQNIGILF EIRREDGLPF DEKSLNVKLR
LFSKVNHMLL ATGSPMTFFR EQRSQYLIRI AGHDRTGSTC LTGKGTVRSY QSCGNGLSRT
VSSVRCVPPI GSTTFTSTST RTTTTASKHS NCDDNPHRDH PSDTTGHCKR YRLRGTTLPN
NKSGVRVTTN TGHVLQTDLP RIMGGRDTAP QPIETLLAAL MGCTQATAVF VARKMTPRVV
LDRLELALTA ERDERGALAL PIETPPAIPA RLQRVSGTVT LYAARQERLS TNELMLLREQ
TELRCPVANL LTASGCVMEV EWIDGNAKQA
|
|---|
| |