Gene PHATRDRAFT_44679 details

Gene Information

• Locus tag: PHATRDRAFT_44679
• ID: 7197889
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 1246368
• End bp: 1247007
• Gene Length: 640 bp
• Protein Length: 187 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002178393
• Protein GI: 219115195

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGGTAACGTG CAATCTCTAC CTTGACAATT ATTGACGCGC ATACAATGAA AAGCTGCCGA 
TTCGGTGGTC GTTGTGTTGC TCTTGTCGGA TTGTTCGCCA AGCCGCACAT GGCGTTTGTT 
GCGAACCGAT TGGCCGTAGT CGGGGCGAGC AACCCAGCAG TCAGCTTTTC GTCAACTTTG 
TACGCACCAA AAGCGTTCCG CATGAGCAGC TCCCGCGCGA GCTCTACGAG CGGAGCTGCC 
GCGCCCATCA AGCACATTGG CAAAGCCGAA ATGCAAGAGA TCCTCGAAGA CTACGAGGAT 
GGAGGCACCG AAGAGTCTCG CTACATCGTT ATTGACGTTC GCGGTGACGA CGAGGTCATG 
TATACTGGCA AACTCGCACC GTCGGTAATT ACCTTACCGA TTCAAGTCAT CATGAGCTCC 
AACGCCTTTC AAATGGATCC GGATGATTTC GAAGAGGCAT TCGGGTTCGT CAAACCTGAT 
TTAGACGACA CACTAGTGTT TACCTGCGCT GCGGGAGTGC GGAGCGTATA CGCTTGTCAA 
GCTGCCGCCC GAGCCGGCTA TTCGAAGCTC GTCAATTACG TTGGAGGCGC TAACGACTGG 
TTCACATAAA ATACTCTGAT AAAACCACCA GCACCCTTCG 

 

Protein sequence

MKSCRFGGRC VALVGLFAKP HMAFVANRLA VVGASNPAVS FSSTLYAPKA FRMSSSRASS 
TSGAAAPIKH IGKAEMQEIL EDYEDGGTEE SRYIVIDVRG DDEVMYTGKL APSVITLPIQ 
VIMSSNAFQM DPDDFEEAFG FVKPDLDDTL VFTCAAGVRS VYACQAAARA GYSKLVNYVG 
GANDWFT