Gene PHATRDRAFT_44671 details

Gene Information

• Locus tag: PHATRDRAFT_44671
• ID: 7197655
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 1223315
• End bp: 1225557
• Gene Length: 2243 bp
• Protein Length: 428 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002178388
• Protein GI: 219115185

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.364916
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCTACGGCTA TTGTTGGTAC GCCATTTCCT ACTACCCACC TCGCTAATAA CCCAAACTTG 
CTGCCGCTTA CCCGTAATGC ACATTGAGAA AGGATCATTT TTGAATCCCA ATCTCTCTGT 
CAAAGCGTTC GGTACGAATC CTCGAGGCGG GAGGCGGTAA CAATTGTTTC TGTAGTCCGA 
AACGGTCAAC TTCCGGGAGG CGACAAGTGC CAAATAGAGA GACGGGGCTT CTCGTACCTC 
CTGTTGGTGA CCAAGACTGG TCGACGGTAC CTTTCGTGAG AGACCGAGTC TCGGGGGGAA 
ACCTTTTACG TTCGACATGA GGGTTACGCT TCTGGTAATC ACCATTGGTA TCGTGGTTTG 
TGCGTTCGGT AGCGTTGTCT CTCCCGTGGC GGCCTTCACA AGCTTGTCGC AGGGCAGCAC 
TCCGCGGCTG TCCCAATCGC CGCAAAGCCA ACCTTTCCCG CAGCGTCGTT GCGACACGAC 
CTTCTTACGG ACAACCCGCA CGACAGCGGA AACACCGTCG ACATTACGTC CGTTGCCTAC 
GACCTCCAGC CATCCAGTAT TCGCCGTCGT CCAGGACTTT CAACTCAAAA AGCCTTGGAA 
AGACGGTACC ACGCCCCTGC TCCAAACCCG TACCTGCAAT ATTGTTCTAG GCCAACTTAC 
GGATTCGCCG CGCCCGGACG CGGCCGGCGC TGCGGAACGC ATACTCCGGT ACATGCTGCA 
GAACGCGCAC GCCCCCGGGG CGCCCGACGT GGTCAGTTTG AATTCCGTCC TGGCGTGCTA 
CAGCAAGCTG GGCAGCGATA AGGATGCCCG AGGCCGACAG CAACAACGTG ATGCTGCGGA 
GCACTCGTAC AGGCTTTTGC GGGAATGGCA AGAACTGTAT AGCCAAGAAA TGGTCGCCGT 
CAACGCGGAT CGGATATCCT ACAATACCGT TTTGGCCGCC TTTTGTCGCT CCGGGCAAAC 
CAACCGGGCT GAGCAAGTCT TTGCCGAACT GCAGCGCCTT GGCCAAGCGA CTGACAACAA 
CGATGATGAC GATCAAAACA ACGCCGCTTA TCGCCCCGAC GTTGTCTCCT ACGCCACGCT 
CATTCGAGCA TACGCCATTC AGGGACAAGC CACTCCGGCG GAAGCATTGT TTCAACAAAT 
GAAACGACAG GGGCCACCAC CGTCCGTCGA ATGCTACAAC AACGTGCTCT ACGCCTATAG 
CAAATCCAGT CGTCCGGACC GCGCGGTCGA ATTTCTACAG TGGTGGTTGG ACGATGATGC 
GATCGACCTT GACGAGTCCG TTCAACCGGA CGTACGATCG TACAATATCG TGTTGCATGC 
ACTCGCACAA TCCAGTGACT TGCAGTCGGT TCACCGTGCG GAACGCTTAC TGGACAGCAT 
GCCCCAGAGA GATTCCGTCT CGTATACGAC CTATGTTGCC GCCTGCTGTC GTCTGTCCGG 
TCGTTCAGTC CTGGACGCCG TCCAGAGGGC GCTGGACAAG GCGTACGCCG ACGAACACGT 
GCACGTGGAC GCGGCCTTTC TTTCCAACAT TCTATACTCC TTAGCTACCT GTGACGAAAA 
GGACATGCCC GTGTTTGCTG AAGAGCTGGT GACCACCATG ACCACACAAC ACGGCGTCGA 
CGACAGCGTA CTGGCCGTCT ACAACGCACT CATTCACTGC TGGGCCAAGT CGGGAGAACG 
TGACGCCGTT CCGCGGGTAC TCGCCATTCT CCGGTATCTA GAAGCGCAGA CCACGGTCCA 
GCCCGATATC AAAACCTACA CCAATGTACT GGACTGTCTA GCTAAGTCTC GAGACCGGCA 
GAGTCATGTG GAAGCGGAGG CGTTGCTGCA GCGTATGGAA GAGTTGGGGC CGCCGCCAAA 
TGTACAAGCC TACACGTCTC TCATACAGAA TTTCTCGCGT TCCCGACTAC CGTACAAAGC 
CGTCAAGGCG TCGGAAATTT TGCAGCGCAT GAAGGCTTCG GCCAATCCGC TGGCGCGACC 
CAATGTAGTG ACATACAACG CCGTACTGAA TGCCGCCGAG CACACGGATA CCTCCGACAA 
GGTGGCCACG GAAGAAGCGT TAAAAGTTGC GTGCTTGACT TTTGACGAAA TTCGATCGTC 
CACGGTACGA CCGAACCACG TGACATACGG GACCTTCCTG GGCGTCCTTG CCAATCTCAT 
GCCGATCGAT TCCCGTCACG AAATTGTCAG CCTCGTTTTC CGAAGGTGCT GTCTGGAAGG 
ACAGGTCAGT CGGTTCGTTC TGA 

 

Protein sequence

MRVTLLVITI GIVVCAFGSV VSPVAAFTSL SQGSTPRLSQ SPQSQPFPQR RCDTTFLRTT 
RTTAETPSTL RPLPTTSSHP VFAVVQDFQL KKPWKDGTTP LLQTRTCNIV LGQLTDSPRP 
DAAGAAERIL RYMLQNAHAP GAPDVVSLNS VLACYSKLGS DKDARGRQQQ RDAAEHSALD 
KAYADEHVHV DAAFLSNILY SLATCDEKDM PVFAEELVTT MTTQHGVDDS VLAVYNALIH 
CWAKSGERDA VPRVLAILRY LEAQTTVQPD IKTYTNVLDC LAKSRDRQSH VEAEALLQRM 
EELGPPPNVQ AYTSLIQNFS RSRLPYKAVK ASEILQRMKA SANPLARPNV VTYNAVLNAA 
EHTDTSDKVA TEEALKVACL TFDEIRSSTV RPNHVTYGTF LGVLANLMPI DSRHEIVSLV 
FRRSVGSF