Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44529 |
Symbol | |
ID | 7198065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 816033 |
End bp | 817203 |
Gene Length | 1171 bp |
Protein Length | 360 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178583 |
Protein GI | 219115575 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTCGTCCATT GCAACCCATC CAGCACTTTA AGCCAAGCCC TTCCTTGAAC AACAAACTTT CGAATCCAAA AAGCTTGCAA CGCAAACGAT GGGTCTCTTG TCGTTTCTCT TGTGCTTGAA GGCACTACAG ACGGCAACGG CCTTTGGGAG GCAACCGCTT CGGACGATGC GTGCGTACGC TCCACGGAGC TTACGAAGCA CTCCGTTGCC CTTGGCTGGG CAAGCTACGG AGCTGCCGGA TTCCCTAGAA GACGCAGCAA CCCGTGCCGC GCAGGCGACG GCCAATTTTG CGTCCCAGTC GGGGCCGTTG GCACGCTGCC GGGTAGATTT TGACACCAGC GTTGGCGACG AAACCTACAC ACTCCTTAAA TCTAGTACGG AATTTATGCA AAATTTCGTT TCGGCTTTGT GCTACGCCAC CATTCCGGGA TTGCAGGAGC AAAGACAGGC GGAAATGATG AAGGTTGCGG AAGCGCGAGC GGAGCTTAAA GTGCTCTTCC AGGAAAACCC TGAAGACGAT CGCGTCCGTG AGCTTCAAAA AATGCTTGCT GCGAATGGGC GTGATCCGGA CGCGGGTCCG TGGACAGGCC CGGTAGCGCG TGTGTACTTT CCCGATGAAG GCAGTGCGGC TTTGGCACGC CGAGACTGGT TGGGGGTGGA TCCGAAGGTA CCTCCGTGTG TCCAATTTGC TTCCTGTGGT GGAGTGCAAG TTGGCGACAT TCAGAAAGAT CGTATTGTCT TTTTCTTTTG TCCAAAGGCG AGCGAAAGTG AATACGTGGA AAAGATTCTA ATCAACACGG AAACGACAGC GACAGATTTG CAACTTTCTG TCTTGGTGAA TCCAAACTTG GTGGATATGG GAGTCACGGG CTTTGGCATG GCGGGGCGGC GTCTGCGCGA GCGTCTCATT GATCCCTTGC AGAATACTTA CTACCTACGA ACGTTGCCTT GGGGGGCACT CACCCGGCTC TGGCCCCAGG CCTACAGCGT CTGGCAAGAA GATACCGACG CCGAAGGCGG CTACCGCCTT ATTAAAACGT TGGGCCGCCT GCCGTCGAAC CCTGAAGTCG AAGATATCTA CGATATTGAA AACGGAAACA TGGAAGCACG ACAGTCGGGC GGACCGCTGG ATCAGCTAGC AGACTTTGTC AACGGTATGA TGCGATTGTA A
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Protein sequence | MGLLSFLLCL KALQTATAFG RQPLRTMRAY APRSLRSTPL PLAGQATELP DSLEDAATRA AQATANFASQ SGPLARCRVD FDTSVGDETY TLLKSSTEFM QNFVSALCYA TIPGLQEQRQ AEMMKVAEAR AELKVLFQEN PEDDRVRELQ KMLAANGRDP DAGPWTGPVA RVYFPDEGSA ALARRDWLGV DPKVPPCVQF ASCGGVQVGD IQKDRIVFFF CPKASESEYV EKILINTETT ATDLQLSVLV NPNLVDMGVT GFGMAGRRLR ERLIDPLQNT YYLRTLPWGA LTRLWPQAYS VWQEDTDAEG GYRLIKTLGR LPSNPEVEDI YDIENGNMEA RQSGGPLDQL ADFVNGMMRL
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