| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44514 |
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| Symbol | LHK |
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| ID | 7197731 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 780709 |
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| End bp | 783698 |
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| Gene Length | 2990 bp |
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| Protein Length | 850 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | |
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| Product | light histidine kinase |
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| Protein accession | XP_002178303 |
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| Protein GI | 219115015 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTATGAACGA GTAACATTGC AATTTTATCT AGCAAATGTG TCGCTAGGAA GAGCGGCAGA
GCATCAAGAC TTCTTCAAGA GGAACAACAG TTTACAGCAT CAACAGCAAA TTTGCCAGAT
TTGACAGGTC CTCCGCAGCA ATCGCGAGCA TTGACTTCAC ATCTCAATTC AGTTTACCTT
GCTGCCTGTT AACGTCGCTT AGCAGTGGAC ATGTCTCATT CGCAGACAAC GCCGGCGTCA
AATAAGGGTG TGTCGGTGAT GGAGTTTCGG ACAGAGGAAG CTCTGTTAAA GCATTTGATT
GACGACATCG AGAGCATACC GAGCGATCCA TCTTTGGAGC AGCTTTGCTC GAAAGCTAAA
ACATCTATCA GTAAGACTCC TTTTTGGATC TTGTCTGCTC CTGACGAGGA CCATACAAAG
TCGAAATCCG TTGAGGACGA ATTCCGCCGA CTTCAGACGT TGAAAAGTTA CAATGTTTTG
GATGAAATGT TTGACGAAGA CTTGGATAGG CTAACAGCAA TGGCGAGCCG TATGTTTGAC
GTCCCTATTG CTCTTGTAAG CCTGGTTGAC CTAGGAAGAA TCTGGTGCAT TTCAAATCGC
GGCCTCGGAG AAGTACGCCA GATACCCAGG AAAGATTCAT TCTGCGCGCA TGCGGTGCTT
AGCAACTCCA AGTCCTTTAT TGTTCCTGAT GCTAGCAAAG ACAGCCGCTT TTCGACGAAC
CCGCTGGTTA CTGAAGGCGG AATTCGTTTC TACGGCGGAG CGCCGTTGGA GACACCAGAA
AATTATAGGA TAGGTAACTT TTGTTTGCTG GGTACCAAGC CTCGCCCCGA AGGCCTTTCC
GAAGCTGAGT TAATGACGTT GGTAGACTTT GCTGCCATGG CAGTCAAGGT ACTTGTGGAT
CGTCGGTATC GGAGGGATAC GGAAATCAAA CAGGATTTGA TTGTAGCACA TACGGCACAC
GATCTCATCA CTCCGCTTAC AGGACTTCAA ATGTCCTTGA ATCTTCTGAA CGAAGATGTA
TCCTTGACCA GTAAAATGGA CGACGAACAA CAAGAACTCC TTTCAACTGC TATTGTCTGC
ACTGATATTA TGAGCCGGTT CTGCCACGTT ACCTTGGCTG ATCTAAAAAA AGTGGACCCA
CCCGCCGTAA CAATGACAAG CGAATGCTCA CTATCTCATT CCAATTGTCA TGTCAAAGAC
CTCTTCCGCT GCCTGCATCA GGTAATCAAT ATCATGGCTA GTGTGCTAGC GATCCGACAT
ATTTTAGCTA ACTGTTTTGA CCTTCTTTTT CTACTCAGAC CATTGCTCCT CTTTCGAAGA
AAGTTCCGAT CGTCTTCTCC ATGGAAACAT CCTTAATGAA TCTCGTGGCG TGTGATGGAC
TAGCTCTTTT CCGTTTTGCT TTAAGTCTTC TCTCTGCAGC ATGTGACCGA ACTAAAAGAG
GAAGTATATC CTTGCGCCTT TTTACTCTCA AAGAAGAAAG CACCATAGCT ATTGAGTGTG
AGGACACTGC TACCTCTTTG CTCGCCAAAG ACGTTAATTT GTTGTTCGAC AACAGTCCTG
ATGTGTGTGG ACTCACAGAT CCTGCACTCG GTGGGATACA GTTTGCGATT TCACTTGCGC
ACTCAATCGG TAGTTCCTGC GGGGTACGTG GTCGCTCGCT TGTCGACGAT CAACAGGATA
GCGACTCCGT TGATGGATCA GTGTTTTGGT TCCATCTTCC GGCATCGTTT GATGGTGACT
ATTGGAATGA AAATAGTGAG ATTACTGGGG AAGTAGCGTC GAGGTCGGCT TGCCATGAGG
TCGCTACTGG AACACCTAAT TCGGACTGCT TCTTTCAAAG CGACTTGACC CAAACAATGA
ACTTGCTAGA GCCAAAGGAA AATACTTTAC CTTTGACGGG TACAGAGCTC CCATGTTCGC
CCAAAGAAGA CTCTTTGGAT TTTTTTTGGG ACTGAAGCTG CTTCGAAGGG CTCTAGTTAT
CGATGATTCC TTGGTTGTAA GAAAAACTTT AGTGCGAGGT TTGTCGAGTC TAGGATACGA
AGTTGAAACA GCAAGCGACG GGATGGAGGG GCTCAATGCA TTGAAAAAAC GTATTTACTC
GGTTTGTTTA TGTGACTTTT TGATGCCTAT CATGGATGGA TTGGATTGTG TTCAGCAGTA
TCGAGTGTGG GAAGCAGAAT ATCGTTTTAG CCATCGACAA ATTATTGTTG GTATTTCAGC
ACACGCGACC AAAAAAGACT CAAACATCGC AAGACAGATT GGCATGGATG ATTACATGGC
AAAGCCCATC ACCATCAAAA TGCTCAAAGA TCTGGACGAG AGTGATCTCG TTCGGCATGC
TACGACGCAA AATCAAAACC TTACGAGTCT TAAAGAAGAT ACAGCCGGGA TCGAATTGCC
TAGAAAACGA GCCCTGTCAG TTGGATCAAA GTACGTGCCG GTTCCTCGTC TAATGAAATC
CAAGTTTACA CTTCCGAAAG TTAAACGAAA TGAGCTAATT GACCACCCTC GTTGCTTAAT
AGCAAAACTT GGCTCCATCG ATGGTTCATC AGACCTCACA CAACTGTTTA CAAGGAGTGG
TTGGCAGTGT GAAGTTGCGA GTAATGAGGC TGAGCTGTCG TTGATGCTCC GCAATCGAAA
CTGGGATGCT GTACTTATCG ACGACTGCAT GTTTGAACGC AATCAGACTT GCATCTTGGA
ATTTCGTGTT TGGGAAACAA AGAACCGTAT CAATCGGCAA AGAAATCTAT TTCTTCATTT
TGCAATAGCC CAACAGACGA CAAAGCTTGC CATGGAAACT ATGTTCTTGC TAGCGCCTGA
AGGATTCGAC GGAGCTATCC AGATACCGCT TCTGTGGGAC GACTTTGTGT CAATTTTTAA
ATCAATGAAC TCAGATACCA GAACTATGTC CATAATAACA CGATAGAAAA GATTTGTTTT
GCCAATAATG GTAACTGTAA GTGTTAATAA AGAACGTCTT CAACTGGTTC
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| Protein sequence | MSHSQTTPAS NKGVSVMEFR TEEALLKHLI DDIESIPSDP SLEQLCSKAK TSISKTPFWI
LSAPDEDHTK SKSVEDEFRR LQTLKSYNVL DEMFDEDLDR LTAMASRMFD VPIALVSLVD
LGRIWCISNR GLGEVRQIPR KDSFCAHAVL SNSKSFIVPD ASKDSRFSTN PLVTEGGIRF
YGGAPLETPE NYRIGNFCLL GTKPRPEGLS EAELMTLVDF AAMAVKVLVD RRYRRDTEIK
QDLIVAHTAH DLITPLTGLQ MSLNLLNEDV SLTSKMDDEQ QELLSTAIVC TDIMSRFCHV
TLADLKKVDP PAVTMTSECS LSHSNCHVKD LFRCLHQTIA PLSKKVPIVF SMETSLMNLV
ACDGLALFRF ALSLLSAACD RTKRGSISLR LFTLKEESTI AIECEDTATS LLAKDVNLLF
DNSPDVCGLT DPALGGIQFA ISLAHSIGSS CGVRGRSLVD DQQDSDSVDG SVFWFHLPAS
FDGDYWNENS EITGEVASRA KGKYFTFDGY RAPMFAQRRL FGFFLGLKLL RRALVIDDSL
VVRKTLVRGL SSLGYEVETA SDGMEGLNAL KKRIYSVCLC DFLMPIMDGL DCVQQYRVWE
AEYRFSHRQI IVGISAHATK KDSNIARQIG MDDYMAKPIT IKMLKDLDES DLVRHATTQN
QNLTSLKEDT AGIELPRKRA LSVGSKYVPV PRLMKSKFTL PKVKRNELID HPRCLIAKLG
SIDGSSDLTQ LFTRSGWQCE VASNEAELSL MLRNRNWDAV LIDDCMFERN QTCILEFRVW
ETKNRINRQR NLFLHFAIAQ QTTKLAMETM FLLAPEGFDG AIQIPLLWDD FVSIFKSMNS
DTRTMSIITR
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