Gene PHATRDRAFT_44406 details

Gene Information

• Locus tag: PHATRDRAFT_44406
• ID: 7198061
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 449850
• End bp: 455748
• Gene Length: 5899 bp
• Protein Length: 1782 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002178513
• Protein GI: 219115435

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0950443
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAT CCAAGCGAGA CACCGAAATC GCAAGGTCGA CGGAACAGCC CACGGATATT 
CAGAAGTCCC TGCCGGTAAC GGCATTGCCC GTCGGAGACA AACAAGTGCT GGATACCGAA 
GGCGAAGAAG GACTCAAGAA TAAGGAAGGT TTGAAATGTA TAGTGGATGC CACTGGTATT 
CAGGCGTGCG AGAAAGCACT AGAAGATTCC AGCGAAGGAA GGGCGACACA AAAGGAATCC 
ATTTCCGACA AACAACAAAA AATGGAACCT CCTGGAGAAT CAGTCTCTAC ATTCAACGAA 
CAGGAAACAT CTCAGCTTGA AGACCGAAAG TTCCCAGCTG CTCCGCCGAA TTCGTTGGAA 
GACCAATTGT CCGTGAACGT GCTCCCTGAC GAAGCTGCTG CTGAAACAAC TGTAAAGGAA 
TATGTATGTG TTGGGCCCTC TTCTGAACAT GCCGACATAG GGCCTGTTAT TGACAGATGC 
GGCGATCGGG AAGACGTAGC AACTAACAAC TCAGCTCCCA CGAAGGCCGC TCCTCTTATT 
GACCAGGTTT TGATGGCCGA CCTCTCCACT GAAAAAGAAT TTTCACCGCC ACGGCTTTCA 
AAACTTTCGA AGCCGGCGAA CAAATTTGAT GCCGCCACAA TGGACCCGAC TGCCGTTTCA 
CTGGAAGATG CCTTTGATTC TTATGCGTCG GTACGGAAAC GAAAATCGAA GAAAAGAGAA 
ATCCAGATAA AGATCTCATC AATGGCGACA GTGAAAGACG AAAGGATGTC TTTTGGTGAA 
ATTGCCCCTG CTCGCAGGGG TTCTGCCCAC CTTGTCTTTA GGACTGAGTT GCGCCCAGTA 
TGTGAGGTAG GAAGTGAGTT TTACGGAATT TCTGGTCTTG CCGATAAGTT TGAAGTAGAT 
ATGAAAGACT CGCTATCATT TTTTGAAGAG ACGCATGAGG AGCAAGATGC GGCCTTCAAG 
GAGTTTCAGC TTAAACGTGG ATTGGAAGAG ATGCAACGAA AACTTCGCGA AGCCGAGAAC 
GAGGACAAAA AAGGACAAAA GGAGATAGCA GAGTTGATTG GGGCCATGGC AAAAGATAAA 
CAACTTTCGG CTGAACGCAG TTTTGAAAAC TACAAGGCCA AATACACTGA CGATGAGAGT 
CGAGACCTCC AGCGATTGCA AGCCTACTAC CAACAGAAAA CGGCCTCCAG TCAAAATAAA 
ATCAATCAAG GTATCAAAAT TCTTCAACGG CGTCATCAGA GAAATATGCA ACAAGCTATT 
CAGCAGCATC GGGAACAGGT CCAACAGCGC CACCTCCCGG AACAAATGGC TTCTGCAGAA 
TGGCAATCCA CATCTCAGCA GATCCAAGCA AAGCAGCAAA GGGAAATGCA AGACTTTAGT 
GCGAAAGGTG AAGAAATTAA GGCCAAAACC GATACAGATT GCAGGCGAGA GCAGGAGAAG 
ATTCGCAAGC AGTATGAACA AAAACGTCTG AATATCGAGA TCAACCGTAA AAAGCTATTT 
TCGAAACTCT ATACTCAATT CCAGCAGCTT CGGCAGCGCT ATCTCAAACG ACACCTGCAA 
ATGGTGATGC AGAGGAGAAA GAATATAGAA AAAGCTTATG CTGTTGAGCA CAAAACCATT 
GATACGGGAA CGAAACCATT GGGCAATGAT AGCGCCTACA CTCCATTGGA GCTGGCAAAA 
AGCACGTTGC AAGAAAAACC TGAACATCAA CCACCGTCTC CGATTAAATT TTCTCACCGT 
TGGACTTCCC ATGAAAAGTG TCATTCTGCT GGAGGTGGCG CACGGCACAA GCACAGAAAG 
GGAGTCATGA GTCAGGCCAA TAGACAAATA TCCATCGAAA TACACAATGA AGGGATTTGG 
ATTTCCAGTC TCTCGAAGAG CTGTCAGCCA GAGGAAGGGG CAGAGAATGC CAGCCAGGAT 
GAGCTACTTC CATGGGGTAC CAACGCCTAT AGTGTCCTCG AATCCATTAT ATGCGGCGAG 
GTTCCACATT ATTTAGACAC CTTTGATTTT GGAGAAACAG CTACAGCTCA AGGCGGTCAA 
CTTCGGTGCA TTCTCACAGA TCTTCGAACC AGCGATGAGA CAGCATCATC CCAGCGGTCC 
CTTGCTTTCA GGGAACAAGA GGACGCAAAC TTGGCAAACC TTGAAAAGCA GGTTACCGAA 
TTGCTCGAAA AGACCTCCGA GGCAGAAAAG GCTGTGACAC GATGCAGCGA AGAAGAGAAA 
CAATGTCATA CTTCGTTACA AACTGCATGT AAAGAATTGG AGAAGGCCAA GAGGACGCAG 
GACGACTTCA GGTCAAAATT TCGTAACTTT CTTGGCCCAG GTGTGTGATT CCCATCAGTT 
TTCATGCTGT TGAGCTATCG TCTCGTAACT CATGCAATAT TTGCTTTTCG TCTTGCAGAT 
GGCAATCCGA TTGCCACAGC CAATCCAAAT GACAGACAAG AGCTCATGAA GGCGATGCTT 
CGATATAAAT CAAACCTTGA GAATGCTATG AAGAATGAAA AGTCAGCCAA GCAGTCATTG 
GAAGACACGC GGACCAGGCT CCAGAAGCTT CAACTGTTGA TGAAAGCTGG ATACAAAAAT 
TCAGGCATCG CTACTAACGC ATTGAAGAAG AGGAAGACTG TTCTCGCTGC AGCGAGGGCG 
GGCCGAAGTA GTCGCTTCTC GAAGCAGTCA GAGGTCGCGG ATTCTGAGCG AGCAGCTGTT 
CGCGTATCGG ACATTTTGTC TGCTCTAAAG AGGACTGCCG AAAAGAGACG CGATCAATCG 
AATCAGAAAA AAAGCAGCAG CTTTAGTAGC GCCTGGATTC AATCTTTTCC TGGGCTACCT 
AGCTCATTGA AAAAGAGTCT TTGGCACAAG ATGCATCGCA GAAAGCATCA AATAGTGCTT 
CGTCCGACGC AGGAGTCAAT GATTAACGAC TTGCGTAAGT ACGTGGAAAC CAAAATAGGT 
GGCGAGAAAG CGAATCGAAG TCGAATCGAA CAGGAAGCTC TTGAGTCAAA GCTGTTGAAC 
GCAGAGCAAC TGTTCCTACT TGCGATGCAT CCTGCGTCTG ATCTGGAATT TCCTCGGGCG 
CCTTCATCGA AATCAAACGA GGAATGGGCT GAGCCTGGCT GGCAAATGGT TCTGACAGTG 
CCATCCAAAA AGAATAGCGG GATTCTACCA TGCACACCTA GTTTTTCACT TCCGGAAATT 
AATACTTGCG AAATGTTGTC GGCAACTGGT CGCCAGGCTT CGTCGCTTTT TAGAACTTCA 
CAGCTCAAAG GGTTGGTAGC ACCAATGTCT GCATTCGCGG TCGCTTCAAG TCCAGCTGAA 
ACGACCGCCT CCTTGGCAAA CCCAGGTGCG TGCTACAGTC CTGTCAATTG TCCTTCAAAT 
TTATCAGTCT TCTCATCGTT TCCTCGTTGC CGTAGTTATA TGGTCATCGG GGGATCCCTT 
CTTTGCTACA GATGAGGATA CGGCCCTTGG TTACGCATTC CATGCAAAAC AAGCACCAAC 
GAAGCCCCCC CTTCAAAGCA AAAAACCATC CACCGCAAAA GATCCATCAA AATTCGATAC 
GATGAAAGCT TTGTACTCGG CATCACAGAA GAGCAAAACA AGCGGACTTA AAACTGTAAA 
TCCAATTACC GGTACAAAAC GGAGCTCGGT TGATAGTGCA AAGCTTGATA AGTTTCTGCC 
AGTGACCACA AAGACAAGCT CAGAAGCTAC ACCACACAAA AGAAAGACGA GCGATGTATC 
TCAAAGTCAA AGTCGAAAAT TAGGACGGAA ATTAGATCTG ATCTCGGAAG GACAGACTGC 
TGTTGCAGCA GGGAACACAG CAACACAGTA CAACCAGTAC ATGAAACAGC AAATACAGCA 
ACCGCAGCAC TCCCAGCCAC CAATTCAACA GCAGCAGTAT TCTGATCCAG CATCCCAGGC 
TATAAAAAGA CAGCAAAGTT TGACCAAGCC ACACCAAAGT CAACCATCAC AACAAGTACA 
GACTCAACAG CACCACCACC AACAACAAAT TCGGCACCCT GCACAGCAGC AGCAGCTCCA 
GGGTACACCG CAAGCAAATC AATATTCATC TCCACAACAA CGTCAGCTTG CACAGCTTCA 
GATGATGCAA CAACAGCAGC ATCATCAACA ACAACAACAA TCAACACCAC AGCAACATCA 
CCAACAACCA ACTCAGCATC CTCATCAGGC GCAGTCACCG CTTCATCAAA TCACCCAACA 
GCCATCTGTG AAAGCAAGTT TTAGTGCTTC TCAAGCAATG CAGCCCATGC AACAGTTCTA 
CGCTCCGCTG ACCCGTCCTA CTGCTCCAAG TGGACAACAT CCACAGTATC AATCGCCAGC 
TCCAATTCAG GGACGGGTTA TGCCAAATAG CAATTCGTTC AGCGGCAATA TCGGCCCCCA 
CGACGGCCAG AATCCGGCGA ACGGTCCACC ATAACTCTTT AGTGTAAAGT AGCGATTGTA 
CGGATGTTGG GCGGTACTAC ACTCACCTGA GCTTCTTGCG TCAAGGATTT TGGGACGTGA 
AATAAATATA AGCTCTTCCA TACCACCTTT TACAGGGTGA ATCAACTCGA CAGGGTATTT 
CACCCTACCC TTACTTTAAT TGTAAGTCGC TAAGTATCTA CTGTCGCATA ATTCACAGTC 
AAATGTACTG TCGCCGCCAA CTCGTTGGCA TTTGCGCTTC GGTGAAATTG ATATGGGAAG 
CTCATCGCAA CCAAGCTTTC TGTCAACACG AGAACAGAAT ATACTACACA AGCCTTATCG 
AATACCCAAG AGCGCAGTCT CTTTATTTCA CACGCTGCCA ATGACAGCTC TCAGCAAATC 
ATCGTCTTTT CGAAGCGTCG CGCCCTGCCG CGTCTGCTTG TTTGGTGAGC ATCAGGATTA 
CCTCAATCTT CCTGTGATTG CTTTCGCGGG CCCAATTCAC TGCTGCATCC ATGTTTCACC 
CTTGGTCGAT AGAGAAGATC ACGGAGATAC CACGTTGAAA CTCCATGTAC CTTCTCTTAA 
TAAAACAGCA ATCTATAATC TGCGGAGTCT TCCCCCTCGG CAAGGTCCTG ACACCTCGAA 
TCCCGACTTT GCTTTGGCAG CGATACATGA AGCTATCGAC GATGGCTGGA TACTAAGTTC 
AGCCGAAGCG ATATCAACGA CCGATATTCC GATGCAAGCC GGCTGTAGTA GCTCAACCGC 
CTTTGTCGTT GCATGGGTCC AGGTACTTGC AACCCTTGCG GGTGAAGTTT TGACACCAGT 
AGAAGTTGCC CAGCGAGCAC ACCAAGCTGA GGTGACACAT TTTGGAGCGC CGGGAGGGAC 
CATGGATCAT GTCACCATAA GTTTAGGTGG CCTTCTCCGG ATCGGTCCAG CTCCGTGGGA 
CTACGAGATC ATTCCCAATC CTGAAAACGG CGTTTGGATC TTGTCGTACT CAGGAGAACC 
AAAGGAGACT TTAAAACATC TGAAGCGTTG CAAATCGGAG CGTCTAGCCG TGTTCGAAAA 
GCTACGTCAC GATTGGGATA GTAGCGCAGT ACAAGATCTT GACAACAATG AGCTAACACT 
TCTGCAAGCC ACTCGTACAA ACCGAAATAC AGAGAGAGAA GCCTTTCAAC TCTGGAGATC 
TACAGCAGCT AGCGGAACAA ACGGAAAGGC CCTTGGCTTT CTCATGTCCA CACACCACGG 
AGCTTTGCGC GATGGTCTTG GTCTAAGTAC CGTTTCTTTA GAGACTATGA ATAGGGCTGC 
TTTGGATGCG GGTGCGTGGG GTTTCAAGTT GTCGGGGTCA GGGGGTGGAG GTTGTGGGGT 
GGCTTGGGCG TCTGTTGACA AGGCTCATAA TGTACGACGT GCTTTGGAAC TATGCGGAGC 
TGGACCTACA TGGATAATAC ATGAGCCATC AAAAGGAGCT TCAGTTGAAT TTGATATGGA 
TAAAAAAAAA GCATCATGA 

 

Protein sequence

MEESKRDTEI ARSTEQPTDI QKSLPVTALP VGDKQVLDTE GEEGLKNKEG LKCIVDATGI 
QACEKALEDS SEGRATQKES ISDKQQKMEP PGESVSTFNE QETSQLEDRK FPAAPPNSLE 
DQLSVNVLPD EAAAETTVLM ADLSTEKEFS PPRLSKLSKP ANKFDAATMD PTAVSLEDAF 
DSYASVRKRK SKKREIQIKI SSMATVKDER MSFGEIAPAR RGSAHLVFRT ELRPVCEVGS 
EFYGISGLAD KFEVDMKDSL SFFEETHEEQ DAAFKEFQLK RGLEEMQRKL REAENEDKKG 
QKEIAELIGA MAKDKQLSAE RSFENYKAKY TDDESRDLQR LQAYYQQKTA SSQNKINQGI 
KILQRRHQRN MQQAIQQHRE QVQQRHLPEQ MASAEWQSTS QQIQAKQQRE MQDFSAKGEE 
IKAKTDTDCR REQEKIRKQY EQKRLNIEIN RKKLFSKLYT QFQQLRQRYL KRHLQMVMQR 
RKNIEKAYAV EHKTIDTGTK PLGNDSAYTP LELAKSTLQE KPEHQPPSPI KFSHRWTSHE 
KCHSAGGGAR HKHRKGVMSQ ANRQISIEIH NEGIWISSLS KSCQPEEGAE NASQDELLPW 
GTNAYSVLES IICGEVPHYL DTFDFGETAT AQGGQLRCIL TDLRTSDETA SSQRSLAFRE 
QEDANLANLE KQVTELLEKT SEAEKAVTRC SEEEKQCHTS LQTACKELEK AKRTQDDFRS 
KFRNFLGPDG NPIATANPND RQELMKAMLR YKSNLENAMK NEKSAKQSLE DTRTRLQKLQ 
LLMKAGYKNS GIATNALKKR KTVLAAARAG RSSRFSKQSE VADSERAAVR VSDILSALKR 
TAEKRRDQSN QKKSSSFSSA WIQSFPGLPS SLKKSLWHKM HRRKHQIVLR PTQESMINDL 
RKYVETKIGG EKANRSRIEQ EALESKLLNA EQLFLLAMHP ASDLEFPRAP SSKSNEEWAE 
PGWQMVLTVP SKKNSGILPC TPSFSLPEIN TCEMLSATGR QASSLFRTSQ LKGLVAPMSA 
FAVASSPAET TASLANPVIW SSGDPFFATD EDTALGYAFH AKQAPTKPPL QSKKPSTAKD 
PSKFDTMKAL YSASQKSKTS GLKTVNPITG TKRSSVDSAK LDKFLPVTTK TSSEATPHKR 
KTSDVSQSQS RKLGRKLDLI SEGQTAVAAG NTATQYNQYM KQQIQQPQHS QPPIQQQQYS 
DPASQAIKRQ QSLTKPHQSQ PSQQVQTQQH HHQQQIRHPA QQQQLQGTPQ ANQYSSPQQR 
QLAQLQMMQQ QQHHQQQQQS TPQQHHQQPT QHPHQAQSPL HQITQQPSVK ASFSASQAMQ 
PMQQFYAPLT RPTAPSGQHP QVNQLDRVFH PTLTLISNVL SPPTRWHLRF GEIDMGSSSQ 
PSFLSTREQN ILHKPYRIPK SAVSLFHTLP MTALSKSSSF RSVAPCRVCL FGEHQDYLNL 
PVIAFAGPIH CCIHVSPLVD REDHGDTTLK LHVPSLNKTA IYNLRSLPPR QGPDTSNPDF 
ALAAIHEAID DGWILSSAEA ISTTDIPMQA GCSSSTAFVV AWVQVLATLA GEVLTPVEVA 
QRAHQAEVTH FGAPGGTMDH VTISLGGLLR IGPAPWDYEI IPNPENGVWI LSYSGEPKET 
LKHLKRCKSE RLAVFEKLRH DWDSSAVQDL DNNELTLLQA TRTNRNTERE AFQLWRSTAA 
SGTNGKALGF LMSTHHGALR DGLGLSTVSL ETMNRAALDA GAWGFKLSGS GGGGCGVAWA 
SVDKAHNVRR ALELCGAGPT WIIHEPSKGA SVEFDMDKKK AS