Gene PHATRDRAFT_44370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44370 
Symbol 
ID7198048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp365312 
End bp366293 
Gene Length982 bp 
Protein Length311 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178489 
Protein GI219115387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAAATTTAC TGTTTTCCTA GCTTTTGATA CCAAATATAT CTTACAATGA ACCTGCGACA 
ACTTTCTGGA ATACTTCTTT GCTACTGTTA CCATCGTAGT TTTGCCTTTC GATTTTCAGT
AGGTAGGAAC AACGTGAAGG CATCTGGTGG ACCCCCGTCG ATTTATCATG ATGGCGTTTG
GTCGCGTTCA AATCGCGTTT CATTGGAAAT CCGCCAGCTC ACAAATCGTT TCGACGTTCG
ATCGACCGCA CTTCACGCTT TCGACAAGAG GGAGCATCAA ACCAGAGGTG AGTTTGACAC
AGGGGCGGTT TTGAAGTATG GTGCCGCTTT GGCTATACAG ATGACTTTGT TCTTTATCGC
ATTCACTGGG TTGGATGTTA TGGTGGTAAA TTTTGGCGTT GAGGTTCCTT TTATTGCCAA
TTGCTTCCTC TTTTACGTTG CGGCCCTGAA ATCCCGTGCC CTCAATCCCC TCGCCAACAA
CCGTCCACAA CCAAAGAATC TAGAAATTGA CGGGTTGCAA CGCAGGATGC CCACCTGGAC
TCCCCCAGGG ATAGTGTTTC CTATTGTGTG GCTCTTGATC ATCGGCCCTA TTCGTGCTGT
GTCTTCTGCA ATGATATACA AAACTACGGG AAGCTACGCT GTCCCTGCTA TTCTATCTCT
TGCTCTTCAT CTCTCGATCG GCGATATTTG GAATACGATC AACAATGTGG AACGACGCTA
CGGAGTGGCC GTCTTCGGCG TATTGTGCGT TTGGCTATCC AAGGCGTTTG CGGCTTATGA
ATTTTTCCGT GTCAATCAAA TGGCTGGGAA AGTACTCGGG CTCACACTCG TTTGGTTGAC
TGTTGCGTCT GCTCTCGTTA CGCGTACCTG GCAACTCAAT CCTGATCCAA CAACAGGAAA
GGCGCAGCCA CTTTTCCCCA TTAAAGGGAA AACTAAAACG AAGCTCGCGT GGTTTTCTGA
TCTGAAGGGA GAGCAAAAAT AA
 
Protein sequence
MNLRQLSGIL LCYCYHRSFA FRFSVGRNNV KASGGPPSIY HDGVWSRSNR VSLEIRQLTN 
RFDVRSTALH AFDKREHQTR GEFDTGAVLK YGAALAIQMT LFFIAFTGLD VMVVNFGVEV
PFIANCFLFY VAALKSRALN PLANNRPQPK NLEIDGLQRR MPTWTPPGIV FPIVWLLIIG
PIRAVSSAMI YKTTGSYAVP AILSLALHLS IGDIWNTINN VERRYGVAVF GVLCVWLSKA
FAAYEFFRVN QMAGKVLGLT LVWLTVASAL VTRTWQLNPD PTTGKAQPLF PIKGKTKTKL
AWFSDLKGEQ K