Gene PHATRDRAFT_44362 details

Gene Information

• Locus tag: PHATRDRAFT_44362
• ID: 7197838
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 334874
• End bp: 338357
• Gene Length: 3484 bp
• Protein Length: 1083 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002178211
• Protein GI: 219114831

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTAATGTAG CCTCACCGAC TGGTAAATAT ACACCAGCAA GTGTCTGGTC TCCATGATGC 
AAGAGAACGT TGGCGGTTCG GATGGCAACA AGCGCCGCCG GCGGGTTTGG ATCGCCCAGG 
AAGAGCTCCA TTCGCTCGCT GCCTATACGG ACGCAACGGA TCGACGTCTG GAGCAGACAG 
AGATGAGTTT ACGAAAGGAA GTTACGCAAA GATTGGTGCT GCAGAAACGC CTCCGTGATG 
CCGAATTGAA TCGGCAACAC TTGCTGGCGG TCCAAACCCA ACAAGAAATA CTGCGCGACG 
CATTGGCCGA CTCGGTAGCG CAATTGGCGA AAAAAGTACT GGTGGAGGAG TCGCCCTCCA 
ACGTGACAGA GTCCGACGGA GGGGCGGACG ATCTCGTGCG AATAATTCAT ACGGCAGGAG 
ATAGGACTCC GCCTTCTGAC GTACATGGAA CAGGCAGTGC GGACGAGATT GCTCCACACT 
CGCCACGGGA TGCAGCAAGG ACGGCACGCG ATGAACCAGA GATCTGGCCG GACAACAACG 
ATACCAACAA CAACAACGGC GTGACGGTGT ACACTATTAC GGAGGCACGG CCACGCGGTA 
CGGTACATAT TGACGCGTAT CCTCGCCATC ACGAAACGAC CACATCGCAC GGGCACCGTA 
AATGCGGAAC CCCCCGAGTC TCCTGCTTTA TTCCGTGCCT GGCATCGCCA AACGCGGTGG 
CGCGAATACT CGCCGTTTCA ACGAGAGAGG TCTTTGCTTT AGATGCTGTC ATGCGCGACG 
CCGGTCATCG TCGTCAGCTA CTACGGTGGA CGGCACTGGA CTTTGGACTG TGGAGCTCGA 
ATACCGAATC TTCCAAGGAT GGGTCCGGGG CGAAAAATGG TAACGGCGAT CTCCGTAGAG 
ATGCTTCGCC GAAACGACTT GACCCACATC TTCCGCTTTG CCCCTACGAA TTGGCAGGAG 
AGTGTGCCGA TCCTTTTTGC TCCTATCAAC ACATCACCCC GCGGTCGAGT ATAGCAAACG 
TGATGCCGCG CGAGTTTTTG CCTCTACCAA CCATTACAAT CTCCAAAAAA GTGGGCATTT 
TGTCCGATCG GAGGCCTCAT GATCAAAGCG AGGCAACTAG GAAATACGCG GCAAAAGTTC 
GAACGAATGC GGTCGACTCG GAAGATGGAT ATATTCCGTT ACCACAACCA GCCAAGCCCC 
CAATTGCTGC GGCTCCGCAA GATAGTAGTT GCAAAAACGA ACATTTAGGC TGCCTTGCAT 
GGTGGGATAC CTCTGGTATC ATTTCCAACT TTATGCAATG CCCTCATCCT TTCTCTCAAA 
TACGCGAGAT CTTTTCGTTT GATACTGATG AAGTGAGATT TCTTATTGAA GACTCGGATC 
GCATTCCTTC CGCTCTTTAC ATATGGCTGG GTAAAGTTTC GGGAATATGC GCTCTTTCAA 
CCCATGCCGG GCGCTTTGAT GTCGCATGTT CGCTACTGCA GGACATCAAT CGGAGGTTGC 
GAGCAAAACA GCAGGAAACA CAGGAAACTG CCCCTAACAA ATCTCCGATG GTACTGACGA 
GGTCGAGGAT TGCGGTGGGT ATAACGACTT GTTTTAGTCG CCTTTTGGAA AAGTCTTTTC 
TATACGATTC CAATCCCGGG GACGACATTT TTTTGTTTGC GTTTCAAACG CAATTGAAGA 
TTTCTCTTGT TTCTGCCTAT CTCCATAGTC TCTACACACA GGAGATCGAT CCGACATTTT 
CGTCAACACA AACACTCCAT CACTTCGAAG AGATATGGGT TGGTTTGGAA GCTGCACTTA 
CATCCGTACC GCCCGCTTAT TGTGAGGTGA TGGAATGGGA AAAGCTGCAG CAAGTACTCT 
TTTCCGCTTC AAGGGATGAG GACAGGGGGG AGAAGCCTCG GAAACCTAGG CAAAACGATA 
TCAACCACGG CACCGCTAGC CTATTCTTTT TGTCGTCAGG CGGAACTTTG GAGTGTTTGA 
GCCTGATTAA TCGGGTTCAA TTTTCATTGA ACGCAATCGC TTCCCTTGAC TCTCTGATGA 
ACACTGCTCT TCGTTCTTCT TGGAGCGCGT TCAACCACTT GTTCGAAGAC AAGAAATCAG 
GATCAAGCTC CTCTCGACAC GATCTCCTAT TTTTTTCGCA GATTGGATCC ATTGTTCTCG 
CTTGTTTGCG TCGAGCTTCG ACCGCTATCG AGTTGAGTGA TACAGGATTT GCAAAGTCGC 
TGATGGACTA CATCGAACTG TACAATTTGA CCGAGACAAT TCTTTGCTGG CTTGAATCGA 
TTCCGTCCAC TGAGTCTTGG ATCGATCTTC TCCTTGCACC GCTATTTGCG GCCAACATCG 
CTCTCGGCTG TAGGCTGCAG CAATACGATA AGATTTGTCG CCGGCTTCAA GATTTTTTGA 
TGCATAGGCC AAGAAATGAA AGCTGTGCAG GGCTTTGTAC ATTTTCAGAG CTTTTGTGGT 
CCCAATATAT TCAGCTTCAC TTCACTTTAC CCTATAACAT AGCAATGGGT AACATGGACG 
GTCAAAATGG ACATTCATCA CTGACGTGGG AGATTCCAAT GGAGGTCAAC AAATCTCATC 
AGGCCATGTG TCAGGTGTTA TCATCTCGTG AAGTATCTCC CCATCATGTG GTTGCACCTC 
ACGATCAAAC AATGGTTTAC GAGGTGATAC CTGTACTATC AAGTGAGTCA AAAATCTCCT 
CCGAACGGGA AGACAAATTT TCCGAGAACG AGAAAGCGGA AGGCGGTCGG GTATTCACGT 
CGTCATGTAG TTCCTCAATC CGTGACTTCT ACAACCTCGA ACACGAGCCA ATGTCCTTTG 
TGTTCCACCG AGACAGTGCA TGTATGGAAA ATGGCGGTAG TCGGTTGTAC CCAGGTATTC 
CACTTTCGAT ACCAACGGGT TTGCTTTTTG CCGGCTCATC ACTGAAGAGT CTTTCTCTGA 
ATGGTTTTGG GCTGGAGCGG CTACCTGATC ATATGGATAT GTATTTTCCG AAACTTACAG 
TACGTTCGCT GGAGTCGTCA TTCGTTTTTA GCTATCCGAT CTTTCTCACA ATATTTGTTT 
GTCCAAGAGT CTTGAAATCA AGGAGAATTC GTTGGTCATT TTGCCCGAAT CAATTTGCAA 
CCTAACGCAA CTAAGAGTTT TAAGGATCGA CCGGAATATG CTAGGCTCTC TACCGTCAAT 
ATTTCAAATG GTCAGCCTCG TGGAGTTGAC TGCTGCCAGG AACAAGCTGA CGACCCTTCC 
GGCTTCGCTG GCTGAATGTC TGAACTTGCA AGTGTTGGAT GTGAGTGGTA ATCCTATCAA 
TTGCGATTTG CTCTGGTTTG CAGCCAGACT GAAGCATCTT CGAGTCCTCC ATCCTATGTC 
GGAATTAGTA TAATATAGGC ATGTATAGCA GTATGTGAGT GTTGCGTTGT ACTTCGCTCA 
ATATTAGATT CTAAATCAAA TTGAGACGGG CGAAGACCAA GAAAGTCGCT CGTGTTTGTG 
GTAA 

 

Protein sequence

MMQENVGGSD GNKRRRRVWI AQEELHSLAA YTDATDRRLE QTEMSLRKEV TQRLVLQKRL 
RDAELNRQHL LAVQTQQEIL RDALADSVAQ LAKKVLVEES PSNVTESDGG ADDLVRIIHT 
AGDRTPPSDV HGTGSADEIA PHSPRDAART ARDEPEIWPD NNDTNNNNGV TVYTITEARP 
RGTVHIDAYP RHHETTTSHG HRKCGTPRVS CFIPCLASPN AVARILAVST REVFALDAVM 
RDAGHRRQLL RWTALDFGLW SSNTESSKDG SGAKNGNGDL RRDASPKRLD PHLPLCPYEL 
AGECADPFCS YQHITPRSSI ANVMPREFLP LPTITISKKV GILSDRRPHD QSEATRKYAA 
KVRTNAVDSE DGYIPLPQPA KPPIAAAPQD SSCKNEHLGC LAWWDTSGII SNFMQCPHPF 
SQIREIFSFD TDEVRFLIED SDRIPSALYI WLGKVSGICA LSTHAGRFDV ACSLLQDINR 
RLRAKQQETQ ETAPNKSPMV LTRSRIAVGI TTCFSRLLEK SFLYDSNPGD DIFLFAFQTQ 
LKISLVSAYL HSLYTQEIDP TFSSTQTLHH FEEIWVGLEA ALTSVPPAYC EVMEWEKLQQ 
VLFSASRDED RGEKPRKPRQ NDINHGTASL FFLSSGGTLE CLSLINRVQF SLNAIASLDS 
LMNTALRSSW SAFNHLFEDK KSGSSSSRHD LLFFSQIGSI VLACLRRAST AIELSDTGFA 
KSLMDYIELY NLTETILCWL ESIPSTESWI DLLLAPLFAA NIALGCRLQQ YDKICRRLQD 
FLMHRPRNES CAGLCTFSEL LWSQYIQLHF TLPYNIAMGN MDGQNGHSSL TWEIPMEVNK 
SHQAMCQVLS SREVSPHHVV APHDQTMVYE VIPVLSSESK ISSEREDKFS ENEKAEGGRV 
FTSSCSSSIR DFYNLEHEPM SFVFHRDSAC MENGGSRLYP GIPLSIPTGL LFAGSSLKSL 
SLNGFGLERL PDHMDMYFPK LTLSDLSHNI CLSKSLEIKE NSLVILPESI CNLTQLRVLR 
IDRNMLGSLP SIFQMVSLVE LTAARNKLTT LPASLAECLN LQVLDILNQI ETGEDQESRS 
CLW