| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44333 |
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| Symbol | Pt-Spc98 |
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| ID | 7198028 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 258074 |
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| End bp | 260701 |
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| Gene Length | 2628 bp |
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| Protein Length | 843 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | Spc98 |
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| Protein accession | XP_002178462 |
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| Protein GI | 219115333 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCTTTTGGAC TGGCATTCTC TTTGGGCTTG ACTAAGCTTT GTGTTCTCAT CGCAAGATGC
CAAAGCTGAG CGATCACGAC ATCGAAAACG CTCTGTTTAG GCTGGTCCGC TCCACCGTCG
GTCCGGATGC CGACAGCCTG TCGTTGGCGA GACATATCAA CCGCACCGGT AAACAGACTT
GGACAAGTGC CACTAACGGC CAAGCTAACC TGAAAGCGTT GCTGCAAGAT ATCGTCCAGG
AGCTTCCCGA TAAAGAGTCT CAACGAAAAT TGAAGGCGTT GCTGGATCGA CTAGAAACGC
TATACGATGG AGCCGCCTCC AATGCGCCGG CCAGCTTTGT GAAAGTGTTG ACTGAACTGG
CCGAAAGCAA CGGACAACGA CCAGTGATGC CTCTACATCA TCCAACAATC ACAAAAACCG
AAGTCAATGA AAATGACAAA CGAAGGAGTC GATCATTTGA AGAAGCTTTT TTGGAAGCAT
TTAATGTTGA AGAACAATAT GTTTTGCGGG AATGTCTTTA CGCTCTTCAG GGGATCAATG
GGGAAAGGAT ACGCTTTGTA TGGAAATATA AGATAAATGT GTCTCTCCGG GAAGATACCT
ACGAAGGAAT TAGGGTACGA TCTGAAGCCA TCGATCAGCA TCAAGCGCTG CCGCCAAGCT
TACTAGTTCA TTCAAAATTA GGATCAGGTT CTAAGGATGC GATTAGAATG TGCTGCGAAG
CCGGTTGGTT GTACAGCCGT ATAGCGGACT ATCTAAGCAA AGTGCAATCA ATCGAACAGG
GAGCCGTTCT TCGGGCCTTT GCGAGTTCTT TGACGGAAGA AATGCACTCC TACCAATGCT
TTCTAGCTAG GCTAGAAGAA TCGCATCCAT ATTCCATCCG CCAGATGCTT CTGGAACTTC
GGCCACCAAT TTCCAGGCTA CGAATCTTAG CCACGCTGGT GGATGGTCTT GTGCATATTT
CGGGGGGTCC GCTTTTGACT GCCTTATATC TTCACATGCG CCACGGTGAT TCGAGACATG
GGACTTTGCT AAAGCAGATA TTGCACCAAT CGTCTAGGCC TTGGTTTCAA ATGCTTTCGC
TTTGGACAAC CCAAGGCCTC TTGATGGATC CGTTCGAAGA ATTTTTTGTG GAAGAAAACG
AAGGAGTTGC GGACCATAAT TTGTGGAGTG AAGGATACTC TATTAAAGAG CAAAAAGTGC
CGATAGGGGT CGTAGACGAG GGTCTCGTAT TGGTTGCCTT TAGCATCGGA AAGGGGATTA
ACTTCATTCG GAAGTCTTTA CAAGATGGTG AATGGAGATT GAAAATTGAG GATAAAAGTG
CCATTTCCGA ATCAATGTTG AAGGAACCGC GGTCGTCGTT TTTCGTGGAG GATAGCTCGA
TCTCTCGTAA AAATTTGGAC AGCGCTGCTT TGCAGGTTCA TTCTCATATT CTCACATCGC
TACACGACAG GCACCATTTG TTGCAGCATC TTTTTGCACT CAAGCAATTT CTTCTTTTGG
GACAAGGTGA TTTTTATTCT TCCCTTCTAG ATGGTATTCA TCAAGAGTTT GAAGGGCGGC
GGGGAATTGT AGGGGTTTAT CGCCATACTC TAGCTGCTAT AGTTGATTCC GCCTTACGAG
GCACAAACGC TTCTGATTTT CCTGAATTCG TACTGAAACG ACTGCAAGTA GAGCTTCGAT
TATCTGCCGA TGAGGATGCA AGGTATATGT TTGGTTGCTC GAAGGAAAGC GATGCTGACG
TGAGAACGGT TTGGGATATT TTTTTGTTGG AATACAGTGT CCCTGATCCA TTGGTTGCAA
TTGTTCACGC AAAGGCGGTG GAAAGCTATC GAAAATTGTT CCTATTTCTT TTTAATCTTC
GTCGAGTTGA GTTTATGCTC AATCTCACTT GGCGGCACAG TGCAGTTCTG CAGCACGCGT
TGCAGACGGC CGCACAGCAC AATGGCATTA ACGTTTCAAT AAGCAAAGCC TATGCTCAAG
CAACAGTTCT TCTGCGCCAA ATTGCTATTA CGAGGCAATC CATGATGCAT TTCGTAGTAA
ATCTCAAGAG CTATTTGATG TTTGAAGTAT TGGAAGGCGG CTGGAAGCAG CTCGTCCACG
GTATCGAAGA ATCGAAAACT CTGGATCAGG TCATTGCTAC ACACGATGAC TACCTTTCGT
GTTTACTGAG AAAAGGTCTG CTGGATGGGG CTCGTGGAGG TAGCAGCGAG GGGCCCGATG
TTGCGAAGCA ATTTGAGCAA CTCTTTTATC TCTCAGACGA ATTTTGTGCC TATCAGCAAG
AAATGTTTGG AGAGGCACAG GAATCTGCTG ATCGAGCTGC CGTCAAGCGC AGAGAAGCCG
AAGAGAGACT CAATCATGGG CACTGGGGAT TCAGTACGGA AAAGGAAGTC TCCGAAGAGG
AGACATTTTT TGGTCTGGCG GATGCAACCA AGTTGTTCGA GGCCGACAGA ATTTCTGCAT
CATTCGACGA ACAAATTGTC CTACTTCTTC AGGCGCTCGA TCAGAAGTTA AACGGAGTTC
CCTTAGAAAA ACCTTTGAAC ATGAAGACAC CTCCTGCGCA ACGTCTGGAT CGCAATTTAA
GTGAAAGGGA TGAAGGAGAT GATGACTTGG ACTCCCTCAG GTTTTTGA
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| Protein sequence | MPKLSDHDIE NALFRLVRST VGPDADSLSL ARHINRTGKQ TWTSATNGQA NLKALLQDIV
QELPDKESQR KLKALLDRLE TLYDGAASNA PASFVKVLTE LAESNGQRPV MPLHHPTITK
TEVNENDKRR SRSFEEAFLE AFNVEEQYVL RECLYALQGI NGERIRFVWK YKINVSLRED
TYEGIRVRSE AIDQHQALPP SLLVHSKLGS GSKDAIRMCC EAGWLYSRIA DYLSKVQSIE
QGAVLRAFAS SLTEEMHSYQ CFLARLEESH PYSIRQMLLE LRPPISRLRI LATLVDGLVH
ISGGPLLTAL YLHMRHGDSR HGTLLKQILH QSSRPWFQML SLWTTQGLLM DPFEEFFVEE
NEGVADHNLW SEGYSIKEQK VPIGVVDEGL VLVAFSIGKG INFIRKSLQD GEWRLKIEDK
SAISESMLKE PRSSFFVEDS SISRKNLDSA ALQVHSHILT SLHDRHHLLQ HLFALKQFLL
LGQGDFYSSL LDGIHQEFEG RRGIVGVYRH TLAAIVDSAL RGTNASDFPE FVLKRLQVEL
RLSADEDARY MFGCSKESDA DVRTVWDIFL LEYSVPDPLV AIVHAKAVES YRKLFLFLFN
LRRVEFMLNL TWRHSAVLQH ALQTAAQHNG INVSISKAYA QATVLLRQIA ITRQSMMHFV
VNLKSYLMFE VLEGGWKQLV HGIEESKTLD QVIATHDDYL SCLLRKGLLD GARGGSSEGP
DVAKQFEQLF YLSDEFCAYQ QEMFGEAQES ADRAAVKRRE AEERLNHGHW GFSTEKEVSE
EETFFGLADA TKLFEADRIS ASFDEQIVLL LQALDQKLNG VPLEKPLNMK TPPAQRLDRN
LSF
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