| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44310 |
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| Symbol | |
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| ID | 7197971 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 197430 |
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| End bp | 200838 |
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| Gene Length | 3409 bp |
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| Protein Length | 974 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178179 |
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| Protein GI | 219114767 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTTTACATT ACTTCCAAAA ATATACCTGA CAGTGACTGA AAGTTTTATC CAAACGAAGG
GTACAAGTTT ATCTTACGTT GTATCTAACC TTCAAAATCC TCATAAGTTT GAGGTGCAAG
CTCTCCTCGA CTTACGTTGT ATCTAATCTT CAAAATCCTC ATAAGTTTGA GGTGCAAACT
CTCCTCGACT TACATCACAC TACACGATAA GCACAAACAT GAAGGACGGC AGCAACAGTC
GAAATGATTC AAGCACGGAG GGTCGTTCCG TTTTTCGGAA TCTAGTTCCA GATCGCCATG
ATGAACATGA TCCGTCTCCT TATGTACACG AACAACGCAC CACCGCTCCA CCATTGGTGT
ACGATGCGCC CTCCTTGTTG AATGAATCCC AAGCCGAAAC GTCCAACTTT GCAGCGATTC
ACTCGAACTA CAACGACAAC AGCACAAGCA GCACCCGCAC ACCCGCTGTC GGATCTCTTC
GGGATGCCGC GCGGCGTGTT TCCATGCTCA ATCGGACTGG ATTGTTATAC AAACATGTAC
TTTCCTCTTC TCACCAGGCC CATCAACGCG TCTCGTCCCG TGCACAAGAT CTGTTGTCAG
CTATTCAAGA AGGTGGACAT CTCAGCAATG ACGAGCATGG CGATGACAAT GTTCTTGCCG
ACGATATGTC AAGGTCCGAT TTGACGGACG AAGAAGAGCA ATTGCTCGGC ACCGCCAGCG
ATGCGGCCAA CAATACGAAC GACACACTTC CGACTCGTCG TTCGGAGTAC GGCTCCGTTC
TCATGCAGCG ACAAGAATCA ACATCCCAAA AGTCTGTAGC ATTCCGGCGC ATGCGGTCCT
GGCGTCGCAA GGTGGCAGTA CTTTTTCACC CGACCCGCAT GCTGCGAATT GCTTGGGAAA
GCTTTCTTTT CCGTCTAGGC TTGCCCTTTT GCCTAGCAGC GTGGTTGCTG TATTATCCAC
TCGGAAACCC CGAAGTAGAC GCCTTACCTG GCAAGACCCG GCTCTCTTGG TGGTTCAATT
TTGCCGGTCG ACAAGTGATT ACTCTAGAAT TGGCCCGACT CACGCAATGG CTTCTATTGG
ACCTATGGCT GTGTAGAAGT GGTAGTAGTG CTAGGGAACG ACCGTGGTGG AAAGTTGATC
CATTGGTGAC ACTCTGGAGC ATTCACAGCC GCGGATGGCC GTTCCTCATT TCGACTTGGG
CGCTTTGGGA TTTACTCATT TTGCATGGCG ATAATCCCTT CAATACGCAC TGGTTGTATT
GGACAGGCTG GGCTTTGTAC AGCAACGAAA ACGCCAATTC TGGGGCCTTC GTAATCAGCA
GTGACCTGTA TTTGCGGATC TTACTGGCCA TGTTGGTTGC AGGCATTGCC ACCGCAGCCA
AATGCGTTTA TGTTGTCTTG CAATTCAGTC GTCGTCAGGT ACAAACATTT CAAATTCGGC
TTAAGGCAAT TTTGGGCGAG CTCGTCACGG TCTCGCAGAT TGCTGCGTTG GCAACGCAGG
CTGATCTTGT GGCGGCACAA TTGGAGATGC AAATGGATGA AGACTACAAC GCTCCGGTAG
GCACATCCAT TCGTTCCATC GGCTCGTCTC TCAACAAGTC GACCAGACCT CAATCTTCCC
TGCCACGCGG GGCTGCGCCT GTTACAGGGA ACACCAATGT TCGTTGGAGT AACCTACATT
TTGAAGAACA CGATTCCAAA GCTCCAGAAC ACGATGATGA TGATGACGAT TCATCCAGAA
GCGAGAATAC ACCGGGATCC TCGTCTGGTC TCAAACGGTC GTTGTCCCAA GACTCGTCCG
GTAGTTTGGC AGTTCTAAGC CTACTTGATC GCTGGGAGCC ACCAGTCAAC AAGGCGAACA
AGAGCGATGT TGCAATTTCG GACGTGCTTA AATTTCAGCA AGCCTTGCGT TACATGGACG
ATGACGCTGT CTTTGGTGAA GACTTCGGAC CCGCTCGAGA TCGTAACGAG TGCGTGGGAT
CAGCTGTCGC AATGTACCAC AAACTTGTCA AATGGACGCC TGATTCCTAC GTACTTAAGT
TTGACACGTT GGAGATTTTG GCCATGGACG AAGACGGTGT TGTGGATCCA CTAAAGCGAA
AAATGTTACG CAAGCTGTTC CGACCAGATA GATCCGGTCG AATCCCATTG GTTGCATTCA
TCCAATCCAT TGATGCTGTC TATAAGAGAT TGCGTTACTT TCGTGCGTCC GTGACGAACG
CGACAGTGAT TGATGACGTC TTGGAACATA TTGTGGATGG GTTGTTCTAC TTTGTATTGA
GTTTGGTTGT ATTGAGTTTG TTAAATTTCA ATCCCTGGAC CTTTTTGGTT CCCATCACGT
CCCTCATGGT GTCGCTTTCG TTTGCCTTTG GTGGGAGTCT CAGCAAATAC GTCGAGGTAT
GTTATTCGCG GGTCGTCTTG GGAAATTTGC GAATTCTGTT GAGCGCTCAC AAAATTTGCC
GGTTTGCTCA GGGTGTGCTC CTCATTGCGG TCCGACGCCC TTACGACTTG GGCGATCGCA
TTTTCATTGG CAGCGCGGAA GCTCAGGCCG AAAGCGATAT GTCGATCCAA ACTTGGTTTG
TTGAAGGTAA GTGCTTTTGT TGTTGAACAC ACCAATTTTG CGCCGTATGC GTAGGGCTCT
TCCATTAACC TCTTATGTCT ACTATTTCTT TTAGATATCA ATTTGACCAC GACGACTTTG
CGATTCGCTC GTACCAACGA GGTCTCCACT GTTAACAACT GGGCCATTTC CGGCTCTCGT
ATTATCAACT GCAATCGCTC ACCCAATGCT CTCATCTTCT ACGAATGGAA GCTTCATATT
AGCATATTCG ACGGCAAGAA CTTGGATAAT TTCAAGGAAG CTTTGAACAA GTACGTCCGG
GACCATCCCC GAACTTGGAA CAGTCTGGCG TTCATCCGAC ACGACGTTAT TGACGCGGAT
ATGGAACAGG TGGGCTTCCG CATGGCCTTT CGCCACCGGA ATGGATGGCA GGACGCAGCG
CGGATCAAAC TCAACCGGGC AGACCTATTG CGCTACATTC ACGACACGGC CAAAGCCATG
GGGGTCAACT TTGAGACCTC CCCGGCCCGA CGTCTCTTGT ACTACGGTGG CGTCTTGGAA
AGCGGCCAAG TCAAGGATTA CAAGAAGAAT CTGTTGCGTC CATCAAACAT TCGTAGTCAC
AGTCACACCT TTGACGATCA TCGTTTTGAG TCGTCCTACC CCGGTACGGC GGGGATTCCG
CATTCTCCTC CTCCGCAAGC AACTCGAGTC GCTCCACCCC CGGGAGACGT TTTAATGGGT
GAATAGCCTA GCTGCAGGAG TTGTCAATGA ATTATGCAGT GAACGATTCC GAACCGATCA
GGATGGTCCA TTCTTTATAT TTAAGTCTAC TTACTTTCGT GGTTTTACC
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| Protein sequence | MKDGSNSRND SSTEGRSVFR NLVPDRHDEH DPSPYVHEQR TTAPPLVYDA PSLLNESQAE
TSNFAAIHSN YNDNSTSSTR TPAVGSLRDA ARRVSMLNRT GLLYKHVLSS SHQAHQRVSS
RAQDLLSAIQ EGGHLSNDEH GDDNVLADDM SRSDLTDEEE QLLGTASDAA NNTNDTLPTR
RSEYGSVLMQ RQESTSQKSV AFRRMRSWRR KVAVLFHPTR MLRIAWESFL FRLGLPFCLA
AWLLYYPLGN PEVDALPGKT RLSWWFNFAG RQVITLELAR LTQWLLLDLW LCRSGSSARE
RPWWKVDPLV TLWSIHSRGW PFLISTWALW DLLILHGDNP FNTHWLYWTG WALYSNENAN
SGAFVISSDL YLRILLAMLV AGIATAAKCV YVVLQFSRRQ VQTFQIRLKA ILGELVTVSQ
IAALATQADL VAAQLEMQMD EDYNAPVGTS IRSIGSSLNK STRPQSSLPR GAAPVTGNTN
VRWSNLHFEE HDSKAPEHDD DDDDSSRSEN TPGSSSGLKR SLSQDSSGSL AVLSLLDRWE
PPVNKANKSD VAISDVLKFQ QALRYMDDDA VFGEDFGPAR DRNECVGSAV AMYHKLVKWT
PDSYVLKFDT LEILAMDEDG VVDPLKRKML RKLFRPDRSG RIPLVAFIQS IDAVYKRLRY
FRASVTNATV IDDVLEHIVD GLFYFVLSLV VLSLLNFNPW TFLVPITSLM VSLSFAFGGS
LSKYVEGVLL IAVRRPYDLG DRIFIGSAEA QAESDMSIQT WFVEDINLTT TTLRFARTNE
VSTVNNWAIS GSRIINCNRS PNALIFYEWK LHISIFDGKN LDNFKEALNK YVRDHPRTWN
SLAFIRHDVI DADMEQVGFR MAFRHRNGWQ DAARIKLNRA DLLRYIHDTA KAMGVNFETS
PARRLLYYGG VLESGQVKDY KKNLLRPSNI RSHSHTFDDH RFESSYPGTA GIPHSPPPQA
TRVAPPPGDV LMGE
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