Gene PHATRDRAFT_44305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44305 
Symbol 
ID7197967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp176308 
End bp177274 
Gene Length967 bp 
Protein Length291 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178445 
Protein GI219115299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0648478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCATATACCA GACAGCATTT TCGATACCGA TAGTTCTTTT CGTTGCCAGG AGAATTGAAC 
AATCTCATTG CGCGGCAGCA ATGACAACAT CCCCTGCTCG GTGCACATTG CTTTTGGTTG
TTTTTGCGAT CGTCACAGCC GGCGTCGTCA GTGATTCCCC ACTTAGCACT GATGCCCTCC
GTAGCAATGC TTCCCTGACA GTCACAACGA AATCGCACGC TAGCTTTATG GAAGCCCTGT
CGACTTACAG TGCTCCCGCA TATGACGTGA AAGAGCTGCG TGGCGGGAAA ATCAATATGA
TCAGCCTTCA GTTTGCTATT ACTTCTGGGA TTCTTCTCGC TTTTAACAGC GGATACATCA
ATGGCTGCTG TTTGAAAGGA ACTCTCCTCA ATACGAAGCA AGCTGTCGCC GCTGTTACAG
GAGCGTATAC GACGTCAGCT TTGGGTCTTG CTAGCGGTAA CACCGATCAA TTCCGTACTC
AGCTTACCGT GCTAGCGAGC TACATTGGAG GATCGACCAT TGCTGGAATA TTGAATCCTA
TTCCTGTTCC CTTTCAGATG TCTTCTTCGA ATGGGCTTGC GTTTTTGGTG GCCTCTGCTT
TGCTCTGGAG TTCGAGTAGC TTGGCGCAAA AGGGATCCGC AAATATTCTG GTCTTCTGCT
TGGCAGCGAC TGCCAACGGA ATACAAAACA GCGTGACTTC CGCGCACACG TCCAACTTGA
TCCGAACGGC ACACTTTTCT GGAATAAGTT CAGATATTGG AACCTTTCTG GGTCAGGTGC
TACGCGGTAA CCGTCAAAAT CTACACAAGC TGAAAATATT TTTGGCTTTA GCCGTGTCAT
TCTGGTCGGG TGGCTTTCTC TCCTTTTTCG TGTCGGATCG TCTAGGAGCC ACATGCCTTG
TACCAAGCGC CGTACTATAC ACAACAATTG GATTAGGTTT AATCTTATTG GGTTAAAAGT
AACCACG
 
Protein sequence
MTTSPARCTL LLVVFAIVTA GVVSDSPLST DALRSNASLT VTTKSHASFM EALSTYSAPA 
YDVKELRGGK INMISLQFAI TSGILLAFNS GYINGCCLKG TLLNTKQAVA AVTGAYTTSA
LGLASGNTDQ FRTQLTVLAS YIGGSTIAGI LNPIPVPFQM SSSNGLAFLV ASALLWSSSS
LAQKGSANIL VFCLAATANG IQNSVTSAHT SNLIRTAHFS GISSDIGTFL GQVLRGNRQN
LHKLKIFLAL AVSFWSGGFL SFFVSDRLGA TCLVPSAVLY TTIGLGLILL G