Gene PHATRDRAFT_44271 details

Gene Information

• Locus tag: PHATRDRAFT_44271
• ID: 7197947
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 83579
• End bp: 85685
• Gene Length: 2107 bp
• Protein Length: 645 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002178161
• Protein GI: 219114731

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0166766
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATTGTATCTT TATTGCTGTG GCTCAGGATG GGCAAAGTCT TATCACTCGC AAACCTTGCG 
ATTGCTCGTT ATATTTCTCT AACCCCTGCG GTCCGTACCT TGATGCTGCT ACAAGTAGTG 
GCTCTGCTTT TGAACTTGTG CGGCGCTTTT GAGCCACCGA AGACTCTTCG CAATGTTCCT 
CTGGACCGCT CCGATGTCGG ACGTACAGGG CTTTCCCCAG AACCTACGTG CGGACAGTAT 
TTGGCACCGT CTATCCTCCC TGGAGCCGGT TTGGGCATGT ATTCGGGTGT GGAAATCGAA 
GAAGACGATC CTGTGAGCTA CGGAGACATT TGTATTCCAC TAATTGATTT GAAATTGGTA 
CGTCCATTCC CAGGACAGAA TTCTGTATCC ACTTCCCGCA ATGATTCGCA CTTTTCGTAG 
CGGCTTGCAA CGAAGCTTGT GAATACTTTT CGTCTCCACG AGATCTAACG GTGTTTTTTC 
TTCAATACTT TTGCATCAGC ACGTCGGGAA CGATGACAAC GACTTCTACA ATCCCTTTGC 
CGCCTACGTG TGGCAAGCCA GCGCCTTGGG TATGATTGAT CTCAACCTTT CGAAGGATGT 
CAGTGCCTTC TGTATGGGTA TCAACAGTAT TGCCAATTGC CACCTCCCCT TAAAGCATGC 
GTACCAGACT AAGCCGGAAT ACGATCCTCA AGTCCTGCGA CACAGGCACG CCTCGGTTGG 
ATCTTTTACG CCCTATTTCA ACCTCACATC TTTCGCGGCA CGTCCCATTC CGTCGGGCAG 
TGAAATTTTT AAGTCGTACG GCAATTACTG GTTTGAAACC CGATCCGACA CGTTCGGTCA 
ACAGTTTCCT TTGTCGACTT CATACAAGGA AGCTAGCAAC CTTCTGGAAA AATTGTTTGT 
GTCAATGAAA TTGACCAGCT CTCTAAGTGC GAGCTTGTAC GATGAGGTGG TGTTGAGTAT 
CAAAGAATTG CTACCTTCGC GTACCATGAA CGCCTTTCCC AATACGGTAC CCCATGCCAT 
TTTAGGAGCT CACGAAAGCT TGGCTGCTGT TCATCAAACA CTGGTCATCC GAGATTTGGA 
GTGGTTGCGA TTGAATGGTC GGTGCCTGGA TCATATCCGT CCGGGAACGT CAACTCTTGA 
AAACGTTGGG CACGGTGCAT TCGCCACACG AGATTTATCA TCCGGAACTA TCGTGTCTGC 
CTCCCCTGTA CACCACATTG AGCGCGCATT TACCCAAATG TATGAAGTCA GATACGATGA 
AGCTGCCAAA AAACATGTAC CCGACAAATC AAAAATTGTT GCCTATCAGC TGCTATTAAA 
TTATTGCTTT GGCCACAATG AATCAACTGT GTTGGTCTGT CCCTATGGAA ATGGTGTAAA 
TTATATCAAC CACGTCCGGG AACATGCCAA CGTCAAGGTG CGCTGGGCTC AAGACTTCCC 
AGCTCACCAA GATGATGTCC TGCATCAGGC AACCCCCGAA GACCTCTTCA ATTCCACTGC 
GGAACCTAAA TTTGTTCTCG AATATATTGC TTTACGCGAC ATTGTAGCAG GCGAGGAAAT 
ATTTTTGGAC TATGGCGAAT CCTGGGACGC TGCGTGGAAT GCCCACTCCT TGTCCTACGA 
GCCGTTTGGT GGAGCTACCT CGGCTGAACG CTACCGAGAT GCGTTTTGGG TCAACGAAAA 
TCACGGTGAC ATGCCACTAC GAACTCGGCA AGAGCAAATC GTGGATCCGT ACCCAGATAA 
TTGGGTTTTG CGCGTTCACC CCTGGGTCTT GCAGCACCAC ATAAAGTATG GCTACCTTTC 
TGGCAATTAC GATTGGCAGG AGTCAGATCG TACTCCACTC CGCGATGATT TCGGCTTGCC 
TTGTCAAATT TTGGAGCGGC ACGAAAACGG AACCATTCCA CACAAGTACA CAATCCTGGC 
TGATACCACT AGCGTTGATT GGTTCGAGAC AGACAGCGTG GCCATTTCTC AAGTGCCTCG 
ATCGGCTTTG ACCTGGTTGA ACGCACCCGG AACAATGGAT TTTCATCTCC CCAACGCCTT 
TCGACAACCC ATAGGATTGT CGGACGAAAT GATGCCAACC CAATGGCGGA ATCTCCTGGC 
CAAGTAA 

 

Protein sequence

MGKVLSLANL AIARYISLTP AVRTLMLLQV VALLLNLCGA FEPPKTLRNV PLDRSDVGRT 
GLSPEPTCGQ YLAPSILPGA GLGMYSGVEI EEDDPVSYGD ICIPLIDLKL HVGNDDNDFY 
NPFAAYVWQA SALGMIDLNL SKDVSAFCMG INSIANCHLP LKHAYQTKPE YDPQVLRHRH 
ASVGSFTPYF NLTSFAARPI PSGSEIFKSY GNYWFETRSD TFGQQFPLST SYKEASNLLE 
KLFVSMKLTS SLSASLYDEV VLSIKELLPS RTMNAFPNTV PHAILGAHES LAAVHQTLVI 
RDLEWLRLNG RCLDHIRPGT STLENVGHGA FATRDLSSGT IVSASPVHHI ERAFTQMYEV 
RYDEAAKKHV PDKSKIVAYQ LLLNYCFGHN ESTVLVCPYG NGVNYINHVR EHANVKVRWA 
QDFPAHQDDV LHQATPEDLF NSTAEPKFVL EYIALRDIVA GEEIFLDYGE SWDAAWNAHS 
LSYEPFGGAT SAERYRDAFW VNENHGDMPL RTRQEQIVDP YPDNWVLRVH PWVLQHHIKY 
GYLSGNYDWQ ESDRTPLRDD FGLPCQILER HENGTIPHKY TILADTTSVD WFETDSVAIS 
QVPRSALTWL NAPGTMDFHL PNAFRQPIGL SDEMMPTQWR NLLAK