Gene PHATRDRAFT_44258 details

Gene Information

• Locus tag: PHATRDRAFT_44258
• ID: 7197939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 25309
• End bp: 27564
• Gene Length: 2256 bp
• Protein Length: 387 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002178417
• Protein GI: 219115243

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.370371
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGTGTA CAAATACTGG AGAACTCATC ACGAAGAAGG AAGGTGGTCG CTCATCCAGT 
TCTTTCGAAA TTGTTGATGC GCACCATCAT TTTCTAGATA CCAACGAAAA TTCCTTCCAG 
AGCTTTTTGG CTCGTTTTGT TCCCCACACG GCATACTTAC CAGACGACTA CCATCGTGAT 
GTGATACAAC CCTTGTGGCA AGAAAAACGG ATCAAGATTG TGGGATCGGT TCACGTTGAA 
TGCATGCCAG ATGATGGTGT ATCCGAAGTG GCTTGGGTAG AAAGTATCAC GGACTCACAA 
GCACCAGAAG CCCAGCTACC TACAAGGGAC AAGCCTGTTG CGCTCAATTT TTCTGAGAAT 
ACCGTCTCCA TCCCGAACGG ACCCGTAGTC CAAGCCATTG TAGCCTCGGT GGATCTAACG 
CAATCCGATG TACAACAGAC TTTGCATCAA CTGAAGCAGG CCTCTCCCAA AGTCCGTGGT 
GTCCGGTGGA TTCTGGATTG CGTCGGTCCC TACCAGCCGA AAACTGCCAC ACACGTGGCA 
ACGCTACGAC ACGATGGCGA GGACTACCTA GACCACGATG GAAACAGCAA AGGGAAGGCG 
TTTGCATTCG AACGTGGCTT TGCACAATTG GCGACCCACG GAATGAGTTT TGATCTGCAA 
TGTGCGCCTA CGCAGTTACC AGCTGCTGCC GCCTTGTGTG CCAGACACCC TAACGTACCC 
GTGTGCGTGG ACCATTTGGG TAAACCAAGG GCCTTGTTAG GTTTGGACAA TTGTAAGATT 
ATGTCTGAAA ATTCCTCTAC TCCAGACGCT GACGAACTCC AGCGTTGGCG AGAAGGGATG 
CACGCGTTGG CCTCATTGCC GCAGGTGTAC GTCAAGTTAT CTATGTTGGG GTACGCTGTT 
CCGGGATGGA TACAGACTCC AGAACGTGTA GCCTTAGTTA AGTCTTTGGT GCGAGAAATA 
GTGGAGCTAT TTGGTCCCTC TCGTTGTATG TTTGCATTTA ACTGGTGGAA AGACGGCCCA 
ACTTCTGATG CAGATGGAAT GAGTACTGTT GGCCCAAATC CGGTCGAACT GGTGGAGTAC 
ATGAGTGAGT GGCTGAGTGA CTATTCGGAA GCCGAGCGGA AAGACATATT CTCTGGAACT 
GCACGAAGGT TCTATCGATT CTAGAACGAG CACGAGAGTG CTAAATGAAG AGGCCGTTGA 
TGCAGAAGCT ATAACAAGTG AATATTGACA AAACCAGTCT CTATGTAACA TTAGAAAAGA 
AAAGAGTGCG CTAGATGAGT TCGGCCGACA TCCCCGCATG TATTGACGAA CCCTTTCGAC 
ACCCCAGTTT TACAATGATG CCGTCGTAGC TCGAAGTTAA TGGAAATTTT TTAGCTCGGG 
GTAAGGCGGC CCTGTTCGCT CTGCGCATCG TCAAGTTCGG GTACGATCAC AACTCGTGGA 
AGATTGGGGA AGGCAATCTT CACGTTCTCA TCGTCTAACA AGTCGTCGTT GTCATCAAAC 
TCCACGGCTT CTAGAGGTTC GCCATACGCC ATCAACAAGG CCTCAAGTTC GGCGACTGAT 
CGCCTGAGCT CTGAGACTTC CTTCTGTACC AAGGAAACCG TTTCGAGCGC GAGTTTATCA 
TCCGGGGGCA AGTCGAGCCG TTTCCGCTTG GAAAGTTTTG CAAAATTGGC TTGAAGTTGG 
GCCGACATGG TGACGGAGGC GTGACCGCGT TTGGTGCTGT TAATTGGAAA GTGTGCCGGC 
TGGGGATCTC TGCAAGCATC GTGTCTCGTG TTTGCGTCAC CGCCGGTCTC GTCTTCGGTA 
CAGTACGAAA CTGGAGAAGC TTTGGATTGC ATGTTTGTCA TGCAAGTTTA GCCAAAAGCG 
CAAGCAAAAT GGAATGATAC AAGTAGGAAT GTGGTGGTTG GGAGGATGTA ATATCGAGGC 
AAGGTAAAGG TTAAATGAAT GAAGAAGGTA GACTGGGGTG AAGCGAAGAG GGAAGGTTTG 
AACCAGCGGT GTTTTACCAA CTGGTTAGGA ACAATTTACT TGAGTAAAGC AGAGTCAAGC 
CACAGGATAA ATATATTCAC TCAAGAATCG CAAAGGAGCT ATCTGTCACT CCTGATCCAG 
AAGTTGCGGT GACCGGGTTG ACGCCGAAGC ACTGGACGTG GCAGAATCTA CTTTCTAACA 
AGATTGCAAA TTCGCGTGAG ATACAAAGTA TGCCTGGTTG CAAAACATTA CTTCTCCCTG 
AATCGAATCG TCTCGTTGAA ACTGCGCTGC ACACAA 

 

Protein sequence

MVCTNTGELI TKKEGGRSSS SFEIVDAHHH FLDTNENSFQ SFLARFVPHT AYLPDDYHRD 
VIQPLWQEKR IKIVGSVHVE CMPDDGVSEV AWVESITDSQ APEAQLPTRD KPVALNFSEN 
TVSIPNGPVV QAIVASVDLT QSDVQQTLHQ LKQASPKVRG VRWILDCVGP YQPKTATHVA 
TLRHDGEDYL DHDGNSKGKA FAFERGFAQL ATHGMSFDLQ CAPTQLPAAA ALCARHPNVP 
VCVDHLGKPR ALLGLDNCKI MSENSSTPDA DELQRWREGM HALASLPQVY VKLSMLGYAV 
PGWIQTPERV ALVKSLVREI VELFGPSRCM FAFNWWKDGP TSDADGMSTV GPNPVELVEY 
MSEWLSDYSE AERKDIFSGT ARRFYRF