| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34060 |
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| Symbol | |
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| ID | 7197613 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 997564 |
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| End bp | 999365 |
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| Gene Length | 1802 bp |
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| Protein Length | 576 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178339 |
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| Protein GI | 219115087 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATG ACGAGAGTAA GGTTGGCAAT TCCAACAACG AGGCTCATGT CGAGATTACA
TCCTTCAATG AAGCCCTGGT CCGCCCTATT GCGCCGAAAA CGAAAAAGAA GCGCGCGTTT
AAAAAGAAGA ACCCGGCAAT GGGTGACACT GCATTTCTAC GCAAACGAAC GGCTAATCTG
TTGAGTATAA CGAAGCAAAA TTCCGACAAC AAGGAAGGTG CCCTTGGGGG CGGTATGAAA
GTTGATCGGA AGACCTTCCA CTTCCTCATG GATGCTTGGG CATTTTCCGG AGAAATTGAT
GCTGTTGAAC AAGCGAGTGG ACTGCTGTCC CGTATGGAGG AATTGGCATC TTGGGGAAAT
TTCAATATCG AACCTGACGT TCGTTCGTAT ACCAAAATGA TCAACGCCAT CAGCCGTTCG
ACAGCCCCTT CTGCAGGGGA CGAAGCCGAC GCAATCTTTG CAAAAATGGA AGAGCTCTAT
CAAACAGGGA GCAACCGCGC GGCTCGTCCG AATACATATA CCTATACTGC CGTAATAGAA
GCTCATGCCC ATTCCGGCGC ACGGGGCAGT GCTAAACGAG CCGCAGAATG GTGCGAACGA
ATGATTGATG CGTACGAACC ATCACCGCAT AACGAGAACA AAGAATCAAG TGTCCGCCCA
ACTGCTCGTG CTTTTAACGC TGCAATTTCG GCATACGCCA AGTCAGGAGA AGAAGGAGCA
GCGGCTCGAG CAGAACGCTT GTTTGATCGA ATGGAAGAAT TGTACGAGAC GGGAGTTGAA
GAAGCAAAAC CCAACGCTTT CAATTTTAAC TCGCTCATTA CAGCATGGGC TAACTGCTGC
GAGGAAGGTT CAGCACAGCG CGCGGAGGAA ATTCTAGAGC GCATGGAGTA TTTGTACAAG
CAAGGAGATG AGAAATGTAA GCCGACAACA ATATCATTCA ACGCTGTTAT TGACGCGTAC
GCGAAATCGG GTGATGAATA TGCAGCGCAA AAAGCTGAAG AAGTTTTACG GCATATGGAA
GATCTCTATG GATCGGGACA AAATCTTGAC GCTCGTCCGA ATGTAAGATC GTTCAATTCA
GTCATCAATG CTTGGGCAAA AAGTCGAAAC GAAGAGGCGG CTTGGAAAGC GCAGGATATG
CTGGATTTGA TGGAGAAGCT CTACGCTAAA GGTAACAAAG AAGTGCGACC AGATGTACAC
AGCTTCTGCA CGGTAATTAA TGGTAAGGGA CACACAGATT GAAAAATACA CGTCTGGCAC
CGGCTCCACT CACACTAAGT TTCTGTATAA CAGCTTGGGC CCGGAGTCAA CAGCACGGTA
AAGCTGAGCG AGCCCTGAAT TTGTTTCGTG AAATGAAGCA GCTTCATGAG GCTGGTAACA
AGCACTTGAG ACCGAACACG GTAGCAGCGA ATGCGGTAAT GAACGCGTGC GCGTATACGT
CCGGAGATGT TCATGAACAG AACCGAGCGG TAGAAATCGC TCACACTATT TTAAAGGAAC
TGGAACAATC TCCTTATGGA AAACCGGACC AGGTGACCTA CGGGACTTTT CTGAAAGTAT
GTGCAAATCA AATGCCGGAC TGCAGCACAC GCAATCAAGT TATTTCCGTC GTTTTCAAAA
AGTGTCAGAA GACGGGGCAG GTGGGGAATT TTATTCTACA GCAGCTCAAA GCCATGGCGT
CAGAAGAAAC ATATATGATG TTGTTGGGTC GAGGGATCCA CGAAGACATC CAGATAGCGG
ACCTCCCCTC CGAGTGGTGG TGTAATGTTG TCGAGAACCG GTGGAGGCGT CGTGGAAACT
AA
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| Protein sequence | MDDDESKVGN SNNEAHVEIT SFNEALVRPI APKTKKKRAF KKKNPAMGDT AFLRKRTANL
LSITKQNSDN KEGALGGGMK VDRKTFHFLM DAWAFSGEID AVEQASGLLS RMEELASWGN
FNIEPDVRSY TKMINAISRS TAPSAGDEAD AIFAKMEELY QTGSNRAARP NTYTYTAVIE
AHAHSGARGS AKRAAEWCER MIDAYEPSPH NENKESSVRP TARAFNAAIS AYAKSGEEGA
AARAERLFDR MEELYETGVE EAKPNAFNFN SLITAWANCC EEGSAQRAEE ILERMEYLYK
QGDEKCKPTT ISFNAVIDAY AKSGDEYAAQ KAEEVLRHME DLYGSGQNLD ARPNVRSFNS
VINAWAKSRN EEAAWKAQDM LDLMEKLYAK GNKEVRPDVH SFCTVINAWA RSQQHGKAER
ALNLFREMKQ LHEAGNKHLR PNTVAANAVM NACAYTSGDV HEQNRAVEIA HTILKELEQS
PYGKPDQVTY GTFLKVCANQ MPDCSTRNQV ISVVFKKCQK TGQVGNFILQ QLKAMASEET
YMMLLGRGIH EDIQIADLPS EWWCNVVENR WRRRGN
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