Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34027 |
Symbol | |
ID | 7197805 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 916466 |
End bp | 917321 |
Gene Length | 856 bp |
Protein Length | 267 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178328 |
Protein GI | 219115065 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0453701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGTACG AATCGTATCT GATCAAAACC TGGGAGCAGG ACCCTTCTCA ACAACAGGGT TTGTCCTTCA TCGACTTTCT CGTCAGCAAA TCTGGGAGCG ACCCGGGTAA AGCATCTCGT CCCGTCGGCC TCGTGGATGT CGTCAAACTC GTCTTGACAA ATACCTTTCC AAGCGTCGGG ATGGGACCGA CACTCGGATG GCCGCCATCC CTAACGCCGT CATTCAAAAG CACAAAGTTC CCTTCTTTTC CTTCATCAAA GGAGTTCTGG GTGGTGACCT GCAAACCTTG GCCGGTTGTC CCTTCTTTTT ACTCCTCAAC AAGTACTTAC AAGTCTATGG ACCTGTTTTT AACCTCTCCT TCGGGCCCAA GTCGTTTCTG GTCGTTTCCG ACCCCGTCAT GGCGCGTCAC GTCCTGCTTG AAACAAGCCC CGAAAAGTAC TGCAAAGGGA TGCTGGCGGA AATTCTGGAT CCCATCATGG GCAAAGGCCT CATTCCTGCC AATCCAGCCA TCTGGAAAGT CCGTCACCGG GCGATTGTCC CTTCGTTCCA CAAGCAATGG TTGAATCGGA TGATTGCCAT CTTTGCAAAG GCGCCGAAAT TCTCGCCAAT GATTTACAAT GCAAATCAAC CAAGGGGCAG GTCGTTGACA TGGAAGAACG ATTTTGCAGT GTCACACTCG ACATTATTGG CAAAGCTGCC TTCAATTACG ACTTTGGTTC CGTCACGGAC GAATTGCCCA TTGTCAAGGC CGTCTATCGC GTTTTGAAAG AGGCCAAACG AAATCAAACT ACTCCTCGTT TTAGCGCCAT GCTAGAATAT ACTGTACAAA CTTGTTTCGT TGGTGGTGGC AGATAG
|
Protein sequence | MTYESYLIKT WEQDPSQQQG LSFIDFLVSK SGSDPGKASR PVGLVDVVKL RRDGTDTRMA AIPNAVIQKH KVPFFSFIKG VLGGDLQTLA GCPFFLLLNK YLQVYGPVFN LSFGPKSFLV VSDPVMARHV LLETSPEKYC KGMLAEILDP IMGKGLIPAN PAIWKVRHRA IVPSFHKQWL NRMIAIFAKA PKFSPMIYNA NQPRGSVTLD IIGKAAFNYD FGSVTDELPI VKAVYRVLKE AKRNQTTPRF SAMLEYTVQT CFVGGGR
|
| |