Gene PHATRDRAFT_34027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34027 
Symbol 
ID7197805 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp916466 
End bp917321 
Gene Length856 bp 
Protein Length267 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178328 
Protein GI219115065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0453701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTACG AATCGTATCT GATCAAAACC TGGGAGCAGG ACCCTTCTCA ACAACAGGGT 
TTGTCCTTCA TCGACTTTCT CGTCAGCAAA TCTGGGAGCG ACCCGGGTAA AGCATCTCGT
CCCGTCGGCC TCGTGGATGT CGTCAAACTC GTCTTGACAA ATACCTTTCC AAGCGTCGGG
ATGGGACCGA CACTCGGATG GCCGCCATCC CTAACGCCGT CATTCAAAAG CACAAAGTTC
CCTTCTTTTC CTTCATCAAA GGAGTTCTGG GTGGTGACCT GCAAACCTTG GCCGGTTGTC
CCTTCTTTTT ACTCCTCAAC AAGTACTTAC AAGTCTATGG ACCTGTTTTT AACCTCTCCT
TCGGGCCCAA GTCGTTTCTG GTCGTTTCCG ACCCCGTCAT GGCGCGTCAC GTCCTGCTTG
AAACAAGCCC CGAAAAGTAC TGCAAAGGGA TGCTGGCGGA AATTCTGGAT CCCATCATGG
GCAAAGGCCT CATTCCTGCC AATCCAGCCA TCTGGAAAGT CCGTCACCGG GCGATTGTCC
CTTCGTTCCA CAAGCAATGG TTGAATCGGA TGATTGCCAT CTTTGCAAAG GCGCCGAAAT
TCTCGCCAAT GATTTACAAT GCAAATCAAC CAAGGGGCAG GTCGTTGACA TGGAAGAACG
ATTTTGCAGT GTCACACTCG ACATTATTGG CAAAGCTGCC TTCAATTACG ACTTTGGTTC
CGTCACGGAC GAATTGCCCA TTGTCAAGGC CGTCTATCGC GTTTTGAAAG AGGCCAAACG
AAATCAAACT ACTCCTCGTT TTAGCGCCAT GCTAGAATAT ACTGTACAAA CTTGTTTCGT
TGGTGGTGGC AGATAG
 
Protein sequence
MTYESYLIKT WEQDPSQQQG LSFIDFLVSK SGSDPGKASR PVGLVDVVKL RRDGTDTRMA 
AIPNAVIQKH KVPFFSFIKG VLGGDLQTLA GCPFFLLLNK YLQVYGPVFN LSFGPKSFLV
VSDPVMARHV LLETSPEKYC KGMLAEILDP IMGKGLIPAN PAIWKVRHRA IVPSFHKQWL
NRMIAIFAKA PKFSPMIYNA NQPRGSVTLD IIGKAAFNYD FGSVTDELPI VKAVYRVLKE
AKRNQTTPRF SAMLEYTVQT CFVGGGR