| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_33840 |
|---|
| Symbol | |
|---|
| ID | 7197874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | + |
|---|
| Start bp | 471180 |
|---|
| End bp | 472382 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178231 |
|---|
| Protein GI | 219114871 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACAT CGACTATAAG CGCAACGTCG ACCTTAGTCA AGGGTGCAAA TACTCAAGTC
TCTAACCTAC GAAAGATTGC TCCGCAAGGG ACCGCTCGTA ATTCCTCCGC CATGAAGGCC
CCGGCTGCGA TGAGAAAGCG TACGAAACGA CAAAGAAGAG GTGCGAGAAA GCCCACAGAT
ATGCCTCGAC GGCCACTCAG CGCCTACAAT CTCTTCTTCA AAGAGCATCG ATCAGTCATT
CTTGCTGAGC TGGAGAGCAG GGAAGATAAA GATAATTCTG GGCAAGGGAA GAAGGCCTCG
ACAGCTAGTC TTTTCTCGAC TATGGGAAAG GCGATTGCGA AGCGATGGAA AGAGCTTCCG
GAGGAAAATT TGACTCGATT GAAGAATTTG GCCAACGAAG ATATGAACCG ATACCGCAAG
GAAATGAACG AATATCACCG GAAACTCGCG CAAAAAGCCC GTCTCGAAAC AAAGCCTTTG
GACGATAAGA CTGAAATAGG AAAAGAAAGT GACAAGCTGC CCAATCCCGA GCAAGTGCAA
GCTAAGAATG CTAACTCTAC TATGGAAGGA GCAGTCCGTC CTGTTCCCGC ACACACCATG
CAGTATCTCT CTTCGTTTGG TGACACGATC CCTTGGCTGA ATACACGGCA GCTGCTATTG
ATGCAACGGA ATCAGTTTTT CCGGAACCTT CCGCAAGTCA GTATCGGACA AGCGGGGATA
GCCATGGGCG ACAGAGACCC TTTCGAGCAA CTACTGTGTG AACAAATAAT TCGAGCTCAA
CTTCACAGTC AACAGCAGAC TCAGACAACT AGACTAGCCC ATTTTCGCTT TTTAGATCAT
GAGGAAGCGC TACTTCAAGG CAGTGTCTCC GGTTCGGGCC GATTTCATGA AGCGAATGAC
TACGCAGTCG GAAACAATGC AATGTTAGGA GTCGGCTATC CGGGTGCAAT CACCTCTCGT
ATTTATGGAG CGGATGGTTT CCTACATCAA GGCTATGTGA CTCTTGGTCA GCATAAGACT
GGCAGACAGT TCTTAAGTTA TACTGGACGA AGACAAGGAC AATACCAGCA ACTTTTAGCT
CAGCAGCAAG TCGAGCGAAA CCTCGAGCAA TATTTGGCTA CCGGATCAAG CCCAACGTCC
TTTGGATTGG TTGATTCGAA TAGATCAAGA GGAAATCATC CCTACAGGTC ATCATTACCT
TAA
|
|---|
| Protein sequence | METSTISATS TLVKGANTQV SNLRKIAPQG TARNSSAMKA PAAMRKRTKR QRRGARKPTD
MPRRPLSAYN LFFKEHRSVI LAELESREDK DNSGQGKKAS TASLFSTMGK AIAKRWKELP
EENLTRLKNL ANEDMNRYRK EMNEYHRKLA QKARLETKPL DDKTEIGKES DKLPNPEQVQ
AKNANSTMEG AVRPVPAHTM QYLSSFGDTI PWLNTRQLLL MQRNQFFRNL PQVSIGQAGI
AMGDRDPFEQ LLCEQIIRAQ LHSQQQTQTT RLAHFRFLDH EEALLQGSVS GSGRFHEAND
YAVGNNAMLG VGYPGAITSR IYGADGFLHQ GYVTLGQHKT GRQFLSYTGR RQGQYQQLLA
QQQVERNLEQ YLATGSSPTS FGLVDSNRSR GNHPYRSSLP
|
|---|
| |