Gene PHATRDRAFT_33756 details

Gene Information

• Locus tag: PHATRDRAFT_33756
• ID: 7197823
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 277875
• End bp: 280738
• Gene Length: 2864 bp
• Protein Length: 711 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002178198
• Protein GI: 219114805

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0254551
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGCGAA AGAAGAAAAT TGCATCCCAG CAACCGGAAT CATCGAATCA ACCGGCTAAG 
AAAGCAAAGC CAGAAACTGG TCCGTCGTTT CTCGTGAAAA AGTACCGGCC GGATAAGCAT 
TATGCATCGA TGGACGCTTT CGTCAAGTAC GCGAAGTCTC ACCGAATGCT GGACGCGGCC 
TATGTACAAT GGAACAAAGG CGTAACGGCC GAGAAGCCGT TTGTTTTTTC TGTACGGGTG 
GGTGGGGTAG ACCTCGGTTG GGGGCGGGGG AAGACGCGTG AGGCTGCCAT GGAATGTGCC 
TGCCGAGCAG CCTTTGCCTT GGTTGGAGCT CACGGGTATA AAAATTGGAC AATTGATGAC 
AACTGCTTGA TGGAAGAACC AGTAGATGTG CCTCCTCCAC CACCGCCTCC GATGCCCGGC 
GCGATGGCGC TCGGCTTGCC TCCTTACCCT CCAGGCAGCC TCCCTCCTCC TCCCATGCCC 
GGCTTTTTAC CACCGCCTCC CCTTCCCGGT ATGCTTGCGC CTCCGCTGCC TCCCGGTGCG 
CCACCGCTTC CTGATGCACC CCCACCTCCA ATGGCAGCGG ACCTTATCCC TCAGCCCCAA 
ATGGTATCGA ACCAAGCGCC CGTAGCAACG AGCGTAGCGT CCGGTGTCGC CAATAATGTG 
AACTCTGCTG TAAGTGATGC GTATACAACT TCTGCAAGCG TATCTCTCAA TTTTGGAAAG 
CCTGCTGTTG TGAAGAGTCA GCGAAAGCAA CTCAAGGGTG GATTGACTCT TGTGTACGAT 
CCGCTCTCGG AAGGAATGGA AGAACTGAGT ATGGAAGAAC GACGAGCTAG CCTAGAAAGA 
TATCAAAAAA TGTTGGTGCG CTCTGTGGCC AAGTAAGGAA CTACTATCTT GTAAGTAGGA 
ACAAGAATAT ATGAATGGCT GTGAGTCTCA TTTTGCCTTC AGGGTGGCGA ATAGCGGAGA 
ATTTTTTTTG GGAATATCAA GGTATGTCGC GTTCTCGCAA CTGGTGGGGT AAGATAGAAA 
CGTAAGTTGT TACATTGGCA ATCTTTTTGG TGTCTTGCCG GTAAAGCCCA TCATTGGAAG 
CATTGACTAT GAGGTATGTG GTATTTTCAT CTTTGTTCGC GATGAGATTC ATGCGATAGG 
ACCCGAGTAG GGTCGTCAGT TTGTTCCTTA CCGGGGCTCT TGGCAGCTTC GTCTTATGAA 
AACTCCGCTG AGACTACGCT TGTACTAGTA AAAGTTCCAT AAACTACAAG GTGGAACTGA 
TATCTTGCGT GTCTTTACTT TTTGTTGACG CTACGAGGTA GGGTAGAAAT TCACATAGAT 
TTCTAACTGT AGAACCGGGT CTGCCTTGCC TTTTCGTCCG AGTAGGTAGT ATTGGGTTTT 
TTCACTGTCT TTGTCAGTTC TGCCACCACA TCACTGTCAC AAGAAATATT TTTCTTTCTC 
GGTCTGGCAA TTTGATCATT CGATTCAATG TGATCTTCCA GCTTGTTCTG ATTGTGAAAG 
CAAATCATTT TACCGTTGTA GGTAATAAGA ACTTTTCTCA TGGCTTCACT TCTACTTTCG 
CTATTGACAG TGAGCAGACG AGCGAGCTCT ATGAGTGTGG CTAAAGGCGC ATTGACTCGT 
CAAGGGCCTG GCATTTATCT ATCGAAGTCG GCGCCAATTC GATGCACGCT TCAACAACAA 
CAACAACAAT CTCTATCAAC CAGAAGCAGC GATGATCAAC GAAATCAGAG CGCTGGTCAA 
GTTATCAAGG ACCACCAATA CTGCGTTGAT CTTGTCCGCG AGCGGGACAG GGAAGGATAC 
CGTAAGTAGG TTTGGGTTGG ATCAAGGGCA CACTTTGACG ACGCAAGCTT CTCCAAAACA 
ACTCACACTT CGTCGTTCGC TTTTGTTGGT AGTCTGCGGT TTACTGATGC CGCCAGGAGC 
TACCAAAGCG TACTTTGCCA TACGGGCCTT TAATGTTGAG CTAGCGTCCG TCAAAGACTC 
TCACAACTTG CGCCGTCGGG AGCAGCCTGG CCAACAAGAG TCTTCGAGTA GTGTTGCCCT 
GCAAATGCGC ATGCAATGGT GGAGAGACGC CTTGAAGGAA ATTTACGAAG ACGAAATGAG 
TGTTGCTGCT GATCCTATTC TAAGGAATCT ATCGGTGTCC TGCTGGCACA ATCCTGTCGT 
TCGAGCTTTG TCCCAAGCTC ACCAGCAATG TGACTTGACA CGGCGCTTCC TCGAACGCTT 
GATTGATGCT CGCGATTACG ACCTCAGTGT TGCGCAGTAT TCTTCGATGA ATGAAGCGGC 
AACCTATGCA GAGGATACCA TTTCGAGTCT TCTGTACCTA GCCCTGGAGT GTACAGGGGT 
AAGTTCAGCG GTTGTTCTCT GTGTCTATAG TTCTTCCAAC TAGATTCCTT TTCTCACAAG 
CGTGTGTAAC TGCAAAGACT CGCGACGACA ATGCTGATGA AGTCGCTTCA TACGCTGGTG 
TCGGGATAGG TCTAACGACA GCCCTACGCG CGACGCCCTT TCGATTAATG CATGGTGAAA 
TACCCATTCC AAAGGATCTG CTGCGCCCAG CTTTTCCTTA CCAGGAATTG ATGAAACAGA 
CCGAAGAGGA ATATACGTTG ATAGAATCCG ACGCGATAGC ATTTCGCGAG GCAGTCCGGC 
ACATGGCAAA TGCTGCTTCC ACCAGTTTAG CTCGTGCGCG CGATATTCAG GGGCATGTAC 
CGAGGCATGC TAGAGCTTGC TTGCTACCGG TTGTCCCGTC AATTCATTTC CTTTCAAAGC 
TGGAGGGCGT CGATTATCAC TTGTTTGACC CGAAGCTGAA CGATGACACA CGACTGCGAT 
TAATGTTACT CATGGGACGA ACATGGCTCA CAGGAATCTT CTAG 

 

Protein sequence

MGRKKKIASQ QPESSNQPAK KAKPETGPSF LVKKYRPDKH YASMDAFVKY AKSHRMLDAA 
YVQWNKGVTA EKPFVFSVRV GGVDLGWGRG KTREAAMECA CRAAFALVGA HGYKNWTIDD 
NCLMEEPVDV PPPPPPPMPG AMALGLPPYP PGSLPPPPMP GFLPPPPLPG MLAPPLPPGA 
PPLPDAPPPP MAADLIPQPQ MVSNQAPVAT SVASGVANNV NSAVSDAYTT SASVSLNFGK 
PAVVKSQRKQ LKGGLTLVYD PLSEGMEELS MEERRASLER YQKMLVRSVA KVANSGEFFL 
GISRNVSCYI GNLFGVLPVK PIIGSIDYEV IRTFLMASLL LSLLTVSRRA SSMSVAKGAL 
TRQGPGIYLS KSAPIRCTLQ QQQQQSLSTR SSDDQRNQSA GQVIKDHQYC VDLVRERDRE 
GYRATKAYFA IRAFNVELAS VKDSHNLRRR EQPGQQESSS SVALQMRMQW WRDALKEIYE 
DEMSVAADPI LRNLSVSCWH NPVVRALSQA HQQCDLTRRF LERLIDARDY DLSVAQYSSM 
NEAATYAEDT ISSLLYLALE CTGTRDDNAD EVASYAGVGI GLTTALRATP FRLMHGEIPI 
PKDLLRPAFP YQELMKQTEE EYTLIESDAI AFREAVRHMA NAASTSLARA RDIQGHVPRH 
ARACLLPVVP SIHFLSKLEG VDYHLFDPKL NDDTRLRLML LMGRTWLTGI F