Gene PHATRDRAFT_33660 details

Gene Information

• Locus tag: PHATRDRAFT_33660
• ID: 7197942
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 35370
• End bp: 38672
• Gene Length: 3303 bp
• Protein Length: 253 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002178154
• Protein GI: 219114717

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.83302
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTCA AGCGCAAGTT TGTCGCGGAC GGTGTCTTTT ACGCCGAACT GAACGAGTTG 
TTGACGGCGG AACTCGCCGA AGAAGGGTAC GCCGGAGTGG AAGTCCGCAC GACGCCGCAC 
CGTACCGAGT TGATTATCCG CGCGACCCGC ACACAGAACG TGCTCGGTGA GAACAATCGC 
CGCATTCGGG AACTTACTTC GGTGGTGCAG AAGCGCTTCA ACTTTGCCGA CGGTGCCGTG 
GAGTTGTACG CGGAGCGTGT GCAGAACCGC GGACTGTGTG CGCAAGCGCA GGCGGAATCG 
CTCAAGTTCA AGCTTCTCGG AGGATTGGCG GTGCGTCGTG CGTGCTACGG TGTCGTGCGA 
TTCGTCATGG AAGCCCAGGC CAAGGGGTGT GAAGTCGTGG TGACTGGAAA ACTGCGTGGA 
CAGCGTGCAA AGGGCATGAA GTTCGGTGAC GGATACATGA TCAAGACGGG ACACGCCGGA 
CAAGTCTACA CCGATTCCGC CGTTCGTCAC GTTCTCATGC GACAAGGAGT CATTGGAATT 
AAGGTCTCTA TCATGCTTCC GCAAGATCCC AAGGGACAAA TGGGTCCCAA GATTCCGTTG 
GATGATGTGG TGACCATTCT GGAACCCAAG GAGGAACCGT CTCCGGCGCA ATTGATGGCA 
CAGCAAGCCG CGGCGGCTGC CGCTTACCAG GCGGCGGCTC CTCCCATGAT GGAAGCACCC 
GTCGACCCGG CGGGTATGGC TCCCGTCGAT CCCGCCATTC AAGCCGGATT CTAACTATAG 
TCGTTGCCGT TTACCTACTG GTTTGTGTGT GTGTCGTGAG TGTGTGTACA TATATATATG 
AGAGTGTGTG TGTTTGTATC GGATAAGCGA GGGTTAGTTC TAACTGTAAG TTAAGGGGGA 
CGGGTACCTA CAGGAGAGCG CCATACTTGT CTAGTATGCT CGCCATTCGT ACTGCGTCTT 
ACAGTTCGGG ATCGTCGACG AATCGGGCTT GCAGATTGCC GTCGAGATCG AGTCGACAGG 
AAGGCCCGTC GGCTTGGTCT TGTTCCCCAA AGATGTACCG GTTGTTGGCG ACGACTTGGT 
AGAGACCATC GCGTGTCCAG CGGGGCACGA TTCGCTGGGC CAGGTTGGCC GTGGCGCGGA 
GGACTCGTGG AAGTCCTTCG AGCTGGGTAG CGATAAAGAG GACGGCGTCC GATTCAAACC 
AGGCCCGGGT GGGCGTGACG ACAACAATGG AGGAAATATC GTTGGCGCGT TTGCCGTGTT 
GGAGTAGCAA GGCCTGTCCG GTGCGACTCT GCAAACTGGC GTAGCGAAAG ACCCCGTCGT 
GGGCAGCCGC GTCCCAATCG AGACAGCGGT TGACTCCGGC GTTACAGAAA TTGCACACGC 
CGTCAAAGAG AATAATGGGC TTGGAACTGG TGGCAAAGGC CGTACTAGCG ACGCGGCGCC 
AGTCCCAATC GACCGTTGCG GGTCCGTCCG ACGTGGTTTG GGAGCGGGGC GATGGTGTTG 
ATGGAGTGGT GTCGGTACTG CTGCTGCTGG CACTTGGCGG AGTCGGAGTG GAGGTACTGG 
CGAGGCTGGT TGTTGCGGTT GCGGGTGCGG TTACGACACG TCCGTTGGTA GGAGTGGCGC 
AATGGAACCG TGACGACCGC TGCGGTACGG TCACGATTGA AAAGGCTTGG ACGGATGACC 
ACCGAGCTCC GGTCTCGCTG CCGCGCCAAA CGACGGCGAC GACGACAATG AGCAGATACA 
CGCACTGATG GAGCCAGAGT CGAGATTGAC TGTGAGATGG CAATCGCGTC ATGTTGGGAA 
TAACTGTTCG TAGACTTGGT AAAATTGTCA AAGAACGTTG GAAAACAATC ACAAATCACG 
AAAGGTCGAT CGTGTTGGCC AACACGCAAA AGTGACAAGA GATGGACTAT GTAATAATCG 
TTCGCGAGCA CTCTGGGAAT TCTTCCTTCG TTTCGTTTGC TTTTGTAAAA ACGGTGATGG 
GGTTCGCGAA GGGAAGACTT TATAAGGAAA GAGTACTTTC GTATTCTTCC TGTTCTTACT 
GTTCGTTGTG AGGAACGAAG AATACGACAA TAGCCTGGGC GGCTTCCCGA ACCACAGTTT 
ACCGTTCTGT GAGCGAACCT GGAATCGAAA ATCCTAGCAG TAAATCCACG ACGTGTGCAA 
AATGCTTCGG GTTCCTTTGT GCTGATGATA CCGAAGGGTG CTCTGCTCTC ACTGTCGGTA 
CATGATACCG TCAGTCCGCA GCTGGGAAAC GGGCGAATGA CTGTCCGTCG GTCATTCACT 
GTCCGTCAGT CTATCAGTCT ATCGGTCGGT CTCACCCTTT CTGCAAGGAA AGTACACGAA 
ACGAAAAGTG TAAATAAGTG GGGCGGGGCG GAGAGGGAGG GGTTCGAACA GTAGACACGA 
TTACCGCTCG CAAAATGCAC CGCACGCATC CAGCTCGCCA AGTCTTCCCA CGGGACGACC 
GAACACCTGG TGCCATTCTG AGAATTTGTG TTGTTGTCTC TGGATCTACC GAGTGTGTGT 
GTATCCGCTT TCTTCTTTGT GCCAACTTTA GTAGTAGTAA CAGACATGAG TTACGCATCC 
CCTTCGCCGT CCTACGGGAA TCCTCCGTCG TCACAGCAGC AGCAGCAACA GCAGCAACAA 
CATACGAGTC CGATGCCGGC CTATTCCACA GCGCCTCCCA CGCAACAAGT ACAACAGCAG 
CAACAGCAGA CGTGGAACCA GTCGTATCCA CCTCCGACAC AACAACAGCA ACAACTCCAA 
TCACAGCCTC AGCCGTACTA TCCACAGCAG CAATGGCAAG CACAGCAACA GCAGCCGGTA 
CAGTATCAGC AGCAACAAAC ACAATCACAA CCCGCTCCCT CGTATCCACC ATTGGCGGCA 
CGTCCGTCTG GGACGGCTCC GGCTTCCCGA AATCCCCGTC TTTCTCGGCC ACCTTTTGTC 
GATCCACAAA CCAATATTAT CTACGACACC TCCGACGCCG AATACGAAGG ATGGCTCACC 
AAACAGAGTA CCTGGTTTAA GGTACGTTCC TCCCGCAAAA CTGTACGCAC GGATAATATA 
CGATTGTGTG CGAATACAGA ACAGCACTGC CGTGTGGCAA CGTGATAACA ATCCACCAGG 
CCATTCTGTT TTTGTTTTGG TATTGTTTTT CCGTTCTAAC TTCTACCCCT TTTTTCTAGG 
AATGGCGTCG CCGGTACTTT ATCCTCAAAG GCAGTAAGCT TTTCTTCGCC AAAAACGAAT 
ACGCCGCCCC GCACGGATTT GTGGACTTGG CTACCTGTAC CACGGTCAAA TCCGCCGATT 
TGA 

 

Protein sequence

MSVKRKFVAD GVFYAELNEL LTAELAEEGY AGVEVRTTPH RTELIIRATR TQNVLGENNR 
RIRELTSVVQ KRFNFADGAV ELYAERVQNR GLCAQAQAES LKFKLLGGLA VRRACYGVVR 
FVMEAQAKGC EVVVTGKLRG QRAKGMKFGD GYMIKTGHAG QVYTDSAVRH VLMRQGVIGI 
KVSIMLPQDP KGQMGPKIPL DDVVTILEPK EEPNGVAGTL SSKAVSFSSP KTNTPPRTDL 
WTWLPVPRSN PPI