| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_33648 |
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| Symbol | |
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| ID | 7197936 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 12638 |
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| End bp | 14491 |
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| Gene Length | 1854 bp |
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| Protein Length | 595 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178150 |
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| Protein GI | 219114709 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCATG CCTTGGTTAC TCGAACGCAT GGTCGATATT GGACCGTACG ACGATTGTCG
GGTACATCAG TACTTACATT CCTGTTGCTG ATAGCAGTCG GTCTGAACAT AGGCCGGGTG
CGTCAATTGA TTATTTACGA GGACCTGAAT GTATTGGCGT ACTTGGATAT CCCCCTTCAG
GTTGAGACCA CTGAAGATGT AAGTGTAAAA GGGAGCAGTG GAAACACTTT AAATCCTAAT
TACTGTTGGC TCTGATTTAC AAAGCATTTT TTATTTCAGC GAAACGCGGA AGAGCTGTCC
ATGGACGAAT ACCCAGTCAA ATTCAATACA TTGAAAAGCA CAGATCGGCT GCAAAATGTC
ACACCATCAC CCTTGTTGAC AAAGACAGAT GGTATCCTTT CCACGGAAAA GGGGTCCGTT
GAAGCGGCTA TTGCGACAAA GGATGGTGCG TCGACCACAG TCGCTTTGTC TCGACCAACC
GACCGTACGC TTCGTTTTCC TACAGTAGCT GAGCGGGTTC GGTTTTACAT GTCGTCTTGG
TACGAACCAC CCTGCAGCGA AGTGGACCTT TTACAAGTTG TGCAGCATAC TGGTAGTAAG
CTAAACAGCG AAATGGGGGA TACGACGATT GTCACGAACG GAGGCAACCC GGTCATTGAA
TTTGGAGGCC ACGAGAAACG AGTATATCCT TCTTTTTCAC TGCAGCGTCG AATGCAGTCC
ACGAACAACT CCCTCTCGGT GGTCTTGAGA GCAAGGGCAA TGGCTGGGGG AAATGTTATC
TTTGCTTTAG ACAAGACGTC GCTTGATGTA TGCCAATTTG GTCCCCAACC AAAGAAAATT
TTATGGCAGG TATACTGTCC AGAGCTCCGG GACAAGTTGT TGCTACCGTA TTTAGCTGCA
AACCAAACCA AGTTGGCCGG CAAAGCAAAG AGTGGAGACG AAAAGACGCT CATACTCGCC
CAAGTTGGTG ATGCTTTGGC TACCAGAGTT TTAAATGACT TAGGAGAAAT CAGGCATCAA
TCGCCCAAAC CCTCTGTTCC TCATTTCAAA AAGGTACGAT CTGCCTGGGA AGACAAGGAT
GGAAGAGAAT CCTTGTTGAA TGCATCACCA GTGGCTTGTT CCACGTTACA GAGCCGACGA
ACCAACCACC AAAACTTGGA ACCAATTATT TGGAAAATGG AAATTGACCG GCATTACGGT
GCAGTCCACC AAATCACAGA AGTTGATATT CCTTGGGATC AAAAACGGAA TGTAGGCGTT
TTTCGCGGGG CCACCACCGG GAATGTGAAC CAACGTTTAC CAATGCGCGA GCGCTGCCTG
GAAAACCAAC GTTGTCAACT TGTACTCATG TACCATAATT CATCCTTTGT GGATGCCAAG
TTTACCAATG TCCTAAAGCA AAGCAAACTA CCAACCGAAT TTGATGGCAT AACAATGACC
GGCAGTCGCT TTCAACTGGA TAAACTTTTG GAATTCAAGG TGTTGATATT TTTAGAAGGA
AATGACGTTT CTTCTGGGCT CAAGTGGGGG TTGTACTCCA ATTCGGTTGT ACTGATAAAC
AAGCCCTCCG TATCGTCATG GGCAATGGAA GAACTGTTAG AGCCGTGGGT GCATTATGTG
CCTCTGAAAG ATGATCTTAC GGACGCAGAA ACCCAAATAA AGTGGGTCAT CGAGCACGAT
AGAGAGGCAA AGGAAATTGC GATTCGGGGA CAGCTTTGGA TTCACGACCT TTTGTTTGAC
AAGCATTCAG AAAGAGACAA CGCTGCAATC AACCAGGAAA TACTTAGCCG ATACGAGGCA
CATTTTCGAC CAGGGATTGA ACAAGAGAAT GGGCAACCAA ACTTGGAGAA TTAG
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| Protein sequence | MEHALVTRTH GRYWTVRRLS GTSVLTFLLL IAVGLNIGRV RQLIIYEDLN VLAYLDIPLQ
VETTEDHFLF QRNAEELSMD EYPVKFNTLK STDRLQNVTP SPLLTKTDGI LSTEKGSVEA
AIATKDGAST TVALSRPTDR TLRFPTVAER VRFYMSSWYE PPCSEVDLLQ VVQHTGSKLN
SEMGDTTIVT NGGNPVIEFG GHEKRVYPSF SLQRRMQSTN NSLSVVLRAR AMAGGNVIFA
LDKTSLDVCQ FGPQPKKILW QVYCPELRDK LLLPYLAANQ TKLAGKAKSG DEKTLILAQV
GDALATRVLN DLGEIRHQSP KPSVPHFKKV RSAWEDKDGR ESLLNASPVA CSTLQSRRTN
HQNLEPIIWK MEIDRHYGAV HQITEVDIPW DQKRNVGVFR GATTGNVNQR LPMRERCLEN
QRCQLVLMYH NSSFVDAKFT NVLKQSKLPT EFDGITMTGS RFQLDKLLEF KVLIFLEGND
VSSGLKWGLY SNSVVLINKP SVSSWAMEEL LEPWVHYVPL KDDLTDAETQ IKWVIEHDRE
AKEIAIRGQL WIHDLLFDKH SERDNAAINQ EILSRYEAHF RPGIEQENGQ PNLEN
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