Gene PHATRDRAFT_26201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_26201 
SymbolPGAM_5 
ID7198078 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp896806 
End bp898569 
Gene Length1764 bp 
Protein Length426 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178324 
Protein GI219115057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.449308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCATTACGT TAGTTCTTTG CATTCCAATC TTTTCAGGAA TCAATCCAAA GATCTCTTTG 
CTAACCTCTC TGATCGATCA CAGGCATGTT GGTTCCTCAT CCTTCCGGTA CGGCCATGCG
AGGACTGCGA GAGGAAGCCT GCCGATTCCT CTCTTCGCGA TCCTTCGGCG CAACGGTGGA
TGCGACCCAC GCACGAATGG GAGGAAACTT TGTAAATTCT GTGCAAGCAT GCAATAATGG
GAAACGAGTT TGTTGGCATC AGCGCAATCG GCGCACATTT TCCGTTGTCG CAACGCAGCG
CAACGGGATT GGGCATCGGA CAACCCAGGG GGAAATGGAA GCCGTACCCA GGCGGCACTT
TACGAGTCTC AACCAATCAA CTCCCTTTCA ACTTTGCTTT CTTCGACACG GACAGTCGAC
CTGGAACCGA GATAATATCT TTATTGGATG GGTAAGTCGC TTTATATAAA CTGCAGACTT
TTGCGCTTTG GCAAGGCAGC CGCGCCAAAG CGGGAGCTGT ACAGCGTACG TCTTTCTCAC
TATTCGAATG CTGCTCGATT GCTTGCCTAA AAGACGGACA CTCCGTTGAC TGATGACGGG
GTTTTGGAAG CCCGTGTTGC CGGAAAGATG CTCCACAAGT CCGGTATTCG ATTCGACGAA
GTGCATACCT CACTGCTGCG CCGGAGTATT CGCACGACCA ATCTGGCACT GATGGAACTC
GGTCAAGAGT ATTTGCCCGT ACACAAACAC TGGCGGCTTA ACGAACGCTG TTACGGCGAT
TTAGTAGGCA AGAACAAAAA GGAGGTCGTC ATGCAGCACG GAGCGGATCA AGTAAAACGC
TGGCGTCGGT CGTACGACGA ACCACCCCCA CCCATGTCGG ACGACCACCC CTATCATCCT
GCGCGTGATC CGCGCTATCA AAATGTAAGT CCATGAGATT CGGAAAACTC ATCGTACTCG
CTGTGGATAT CCGTTCCCAA TTATAACTCA CCCCTCTTCG TTTCAATCTT AAAAAGATTT
TGGACGAGTT GCCCAAGTCG GAGTCTCTGA AAAATACCGT GGAACGGTCG AGCTTGTACT
GGGACGAAGT CCTTGCCCCG GCTCTCCGCG AAGGAAAAAC TCTCCTTGTC GTGGGTCACG
AAAACAATTT GCGTTCATTA CTTATGCGTC TCGAGGACAT TGCTCCCGAA GATATCATAA
ATCTGAGTCT ACCACGGGCT GTCCCACTCG CATACCGCCT CGACGAGAAT TTGAAGCCGC
TCCCCCGGGA AGATGGCAAG CTGGACGAAG CGACGGGATT TTTGAAGGGT ACTTGGCTGG
GAGGCGACCA GGCTGTATCG GAGATCTTGG ATCGGGACCA CAAACAAGTT TACGATACGG
CCATTACGAC CAATCTCGAA ATCGGCCAAG ATCGGGAGAA GTGGAATAAT TGGATGGAAT
TTATCATGGG CAAGCCGTCT GCCAAACAAA AGAGAATAGG TGGTGACAAG CAGAACGGTT
TTGCTGGCGG GGCTGCAATA CCCGGCGTCA ATCACCGTAC ATTCACTCTA CAGCAGGAAC
GGAAACAGGA GTCGCAGTAA TGGAGATCTT TGAAAACGGC TGCATTGGAA GAGTTTGTAT
TTGGCATAGC ATGGAAACAA GACGACACCC ACACGGGCGG AACACTACAA TTAGGGGCCA
TTTTGGAGGG TACATGCACA ATGCCAAGGA ATCTTATCTT AGAGCTAGTA ACTATTTTTT
CCAGAGTAAT TAATGTTGTA TTAC
 
Protein sequence
MLVPHPSGTA MRGLREEACR FLSSRSFGAT VDATHARMGG NFVNSVQACN NGKRVCWHQR 
NRRTFSVVAT QRNGIGHRTT QGEMEAVPRR HFTSLNQSTP FQLCFLRHGQ STWNRDNIFI
GWTDTPLTDD GVLEARVAGK MLHKSGIRFD EVHTSLLRRS IRTTNLALME LGQEYLPVHK
HWRLNERCYG DLVGKNKKEV VMQHGADQVK RWRRSYDEPP PPMSDDHPYH PARDPRYQNI
LDELPKSESL KNTVERSSLY WDEVLAPALR EGKTLLVVGH ENNLRSLLMR LEDIAPEDII
NLSLPRAVPL AYRLDENLKP LPREDGKLDE ATGFLKGTWL GGDQAVSEIL DRDHKQVYDT
AITTNLEIGQ DREKWNNWME FIMGKPSAKQ KRIGGDKQNG FAGGAAIPGV NHRTFTLQQE
RKQESQ