Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_26201 |
Symbol | PGAM_5 |
ID | 7198078 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 896806 |
End bp | 898569 |
Gene Length | 1764 bp |
Protein Length | 426 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178324 |
Protein GI | 219115057 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.449308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGCATTACGT TAGTTCTTTG CATTCCAATC TTTTCAGGAA TCAATCCAAA GATCTCTTTG CTAACCTCTC TGATCGATCA CAGGCATGTT GGTTCCTCAT CCTTCCGGTA CGGCCATGCG AGGACTGCGA GAGGAAGCCT GCCGATTCCT CTCTTCGCGA TCCTTCGGCG CAACGGTGGA TGCGACCCAC GCACGAATGG GAGGAAACTT TGTAAATTCT GTGCAAGCAT GCAATAATGG GAAACGAGTT TGTTGGCATC AGCGCAATCG GCGCACATTT TCCGTTGTCG CAACGCAGCG CAACGGGATT GGGCATCGGA CAACCCAGGG GGAAATGGAA GCCGTACCCA GGCGGCACTT TACGAGTCTC AACCAATCAA CTCCCTTTCA ACTTTGCTTT CTTCGACACG GACAGTCGAC CTGGAACCGA GATAATATCT TTATTGGATG GGTAAGTCGC TTTATATAAA CTGCAGACTT TTGCGCTTTG GCAAGGCAGC CGCGCCAAAG CGGGAGCTGT ACAGCGTACG TCTTTCTCAC TATTCGAATG CTGCTCGATT GCTTGCCTAA AAGACGGACA CTCCGTTGAC TGATGACGGG GTTTTGGAAG CCCGTGTTGC CGGAAAGATG CTCCACAAGT CCGGTATTCG ATTCGACGAA GTGCATACCT CACTGCTGCG CCGGAGTATT CGCACGACCA ATCTGGCACT GATGGAACTC GGTCAAGAGT ATTTGCCCGT ACACAAACAC TGGCGGCTTA ACGAACGCTG TTACGGCGAT TTAGTAGGCA AGAACAAAAA GGAGGTCGTC ATGCAGCACG GAGCGGATCA AGTAAAACGC TGGCGTCGGT CGTACGACGA ACCACCCCCA CCCATGTCGG ACGACCACCC CTATCATCCT GCGCGTGATC CGCGCTATCA AAATGTAAGT CCATGAGATT CGGAAAACTC ATCGTACTCG CTGTGGATAT CCGTTCCCAA TTATAACTCA CCCCTCTTCG TTTCAATCTT AAAAAGATTT TGGACGAGTT GCCCAAGTCG GAGTCTCTGA AAAATACCGT GGAACGGTCG AGCTTGTACT GGGACGAAGT CCTTGCCCCG GCTCTCCGCG AAGGAAAAAC TCTCCTTGTC GTGGGTCACG AAAACAATTT GCGTTCATTA CTTATGCGTC TCGAGGACAT TGCTCCCGAA GATATCATAA ATCTGAGTCT ACCACGGGCT GTCCCACTCG CATACCGCCT CGACGAGAAT TTGAAGCCGC TCCCCCGGGA AGATGGCAAG CTGGACGAAG CGACGGGATT TTTGAAGGGT ACTTGGCTGG GAGGCGACCA GGCTGTATCG GAGATCTTGG ATCGGGACCA CAAACAAGTT TACGATACGG CCATTACGAC CAATCTCGAA ATCGGCCAAG ATCGGGAGAA GTGGAATAAT TGGATGGAAT TTATCATGGG CAAGCCGTCT GCCAAACAAA AGAGAATAGG TGGTGACAAG CAGAACGGTT TTGCTGGCGG GGCTGCAATA CCCGGCGTCA ATCACCGTAC ATTCACTCTA CAGCAGGAAC GGAAACAGGA GTCGCAGTAA TGGAGATCTT TGAAAACGGC TGCATTGGAA GAGTTTGTAT TTGGCATAGC ATGGAAACAA GACGACACCC ACACGGGCGG AACACTACAA TTAGGGGCCA TTTTGGAGGG TACATGCACA ATGCCAAGGA ATCTTATCTT AGAGCTAGTA ACTATTTTTT CCAGAGTAAT TAATGTTGTA TTAC
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Protein sequence | MLVPHPSGTA MRGLREEACR FLSSRSFGAT VDATHARMGG NFVNSVQACN NGKRVCWHQR NRRTFSVVAT QRNGIGHRTT QGEMEAVPRR HFTSLNQSTP FQLCFLRHGQ STWNRDNIFI GWTDTPLTDD GVLEARVAGK MLHKSGIRFD EVHTSLLRRS IRTTNLALME LGQEYLPVHK HWRLNERCYG DLVGKNKKEV VMQHGADQVK RWRRSYDEPP PPMSDDHPYH PARDPRYQNI LDELPKSESL KNTVERSSLY WDEVLAPALR EGKTLLVVGH ENNLRSLLMR LEDIAPEDII NLSLPRAVPL AYRLDENLKP LPREDGKLDE ATGFLKGTWL GGDQAVSEIL DRDHKQVYDT AITTNLEIGQ DREKWNNWME FIMGKPSAKQ KRIGGDKQNG FAGGAAIPGV NHRTFTLQQE RKQESQ
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